Factsheet for HORVU2Hr1G068670.2

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion, plastid

Predictor Summary:

plastid 2
mitochondrion 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	mitochondrion, plastid
Any Predictor:	mitochondrion, plastid
ChloroP:	plastid
MultiLoc:	mitochondrion
TargetP:	plastid
YLoc:	mitochondrion

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS2A01G280700.2	Wheat	plastid	86.97	98.72
TraesCS2B01G298000.1	Wheat	plastid	86.74	98.47
TraesCS2D01G279500.2	Wheat	golgi, plastid	86.29	97.96
Os04t0379900-01	Rice	plastid	79.1	90.26
EES10606	Sorghum	plastid	77.3	87.76
Zm00001d025170_P001	Maize	plastid	76.4	86.73
Zm00001d004019_P001	Maize	plastid	75.96	86.22
GSMUA_Achr8P00820_001	Banana	cytosol, nucleus, peroxisome	31.46	85.37
GSMUA_Achr6P27590_001	Banana	nucleus, peroxisome, plastid	28.99	81.65
Solyc06g053480.2.1	Tomato	plastid	68.31	76.57
PGSC0003DMT400042118	Potato	plastid	68.09	76.32
PGSC0003DMT400002555	Potato	plastid	66.74	75.57
VIT_00s0499g00030.t01	Wine grape	plastid	66.52	75.32
CDY17916	Canola	plastid	67.42	75.19
GSMUA_Achr7P22860_001	Banana	plastid	60.9	75.07
Solyc03g063110.2.1	Tomato	plastid	66.07	74.81
KRH71270	Soybean	endoplasmic reticulum, nucleus	65.62	74.68
Bra000321.1-P	Field mustard	plastid	66.74	74.62
AT2G43710.1	Thale cress	plastid	67.19	74.56
HORVU5Hr1G039730.1	Barley	plastid	64.49	74.55
CDY44250	Canola	plastid	66.74	74.44
CDX83464	Canola	plastid	66.52	74.37
Bra004778.1-P	Field mustard	plastid	66.52	73.82
CDX79807	Canola	plastid	66.52	73.82
VIT_05s0094g00750.t01	Wine grape	plastid	53.48	73.68
PGSC0003DMT400041874	Potato	plastid	64.94	73.54
Solyc11g008680.1.1	Tomato	plastid	64.72	73.28
GSMUA_Achr8P08750_001	Banana	plastid	57.98	73.09
KRH50195	Soybean	plastid	65.84	72.89
VIT_12s0034g00180.t01	Wine grape	cytosol	17.3	72.64
HORVU5Hr1G123110.1	Barley	mitochondrion, plastid	62.47	69.67
HORVU3Hr1G094050.3	Barley	plastid	69.21	66.24
HORVU3Hr1G091320.2	Barley	plastid	55.73	65.61
GSMUA_Achr5P25160_001	Banana	plastid	57.3	64.72
HORVU7Hr1G040140.1	Barley	cytosol, nucleus, peroxisome	41.57	57.63
VIT_12s0034g00190.t01	Wine grape	extracellular	21.57	57.48
HORVU2Hr1G012780.1	Barley	mitochondrion	43.82	48.51
HORVU2Hr1G012600.2	Barley	mitochondrion	43.82	48.27
HORVU5Hr1G068310.1	Barley	plastid	43.6	45.33
HORVU2Hr1G006990.1	Barley	plastid	41.35	44.99
HORVU3Hr1G061520.7	Barley	cytosol, peroxisome	42.7	43.58
HORVU3Hr1G092740.3	Barley	cytosol, peroxisome	42.92	43.41

Protein Annotations

Gene3D:1.10.620.20	MapMan:5.1.7.1	UniProt:A0A287IB96	InterPro:FADS-2_CS	InterPro:Fatty_acid_desaturase-2	InterPro:Ferritin-like_SF
GO:GO:0003674	GO:GO:0003824	GO:GO:0005488	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623
GO:GO:0005737	GO:GO:0006629	GO:GO:0006631	GO:GO:0006633	GO:GO:0008150	GO:GO:0008152
GO:GO:0009058	GO:GO:0009507	GO:GO:0009536	GO:GO:0009987	GO:GO:0016491	GO:GO:0045300
GO:GO:0046872	GO:GO:0055114	EnsemblPlantsGene:HORVU2Hr1G068670	EnsemblPlants:HORVU2Hr1G068670.2	InterPro:IPR012348	PFAM:PF03405
PIRSF:PIRSF000346	ScanProsite:PS00574	PANTHER:PTHR31155	PANTHER:PTHR31155:SF11	InterPro:RNR-like	SUPFAM:SSF47240
UniParc:UPI000B47178B	SEG:seg	:	:	:	:

Description

Acyl-[acyl-carrier-protein] desaturase [Source:UniProtKB/TrEMBL;Acc:A0A287IB96]

Coordinates

chrchr2H:+:483269137..483272928

Molecular Weight (calculated)

50232.7 Da

IEP (calculated)

8.260

GRAVY (calculated)

-0.602

Length

445 amino acids

Sequence
(BLAST)

001: PPTQPGTGRN RQPGAPKKRC RRDPGLCSKE NNPSTCPPHR DLARGGGQLS RLAMAFRACL PSHKASPSPS VAQRRAGNGP PPVVAMASTI NEVKTAKKPY
101: APPREVHLQV MHSLPAQKQE IFDSLQSWAR DNLLNLLKPV EKSWQPQDFL PDPSSEGFYD EVKELRERAK EIPDDYFVCL VGDMVTEEAL PTYQTMLNTL
201: DGVRDETGAS PTAWAVWTRA WTAEENRHGD LLNKYMYLSG RVDMRQIEKT IQYLIGSGMD PGTENNPYMG FLYTSFQERA TFISHGNTAR HAKQFGDLKL
301: AQICGTIAAD EKRHETAYTK IVEKLFEIDP DYTVLAFADM MRKKISMPAH LMYDGEDDNL FEHFSSVAQR LGVYTAKDYA DILEFLVQRW KVADVTGLSG
401: EGRRAQDYVC TLATRFRRLD ERAQARAKQG PVVPFSWVYD RKVQL

Best Arabidopsis Sequence Match ( AT2G43710.1 )
(BLAST)

001: MALKFNPLVA SQPYKFPSST RPPTPSFRSP KFLCLASSSP ALSSGPKEVE SLKKPFTPPR EVHVQVLHSM PPQKIEIFKS MENWAEENLL IHLKDVEKSW
101: QPQDFLPDPA SDGFEDQVRE LRERARELPD DYFVVLVGDM ITEEALPTYQ TMLNTLDGVR DETGASPTSW AIWTRAWTAE ENRHGDLLNK YLYLSGRVDM
201: RQIEKTIQYL IGSGMDPRTE NNPYLGFIYT SFQERATFIS HGNTARQAKE HGDIKLAQIC GTIAADEKRH ETAYTKIVEK LFEIDPDGTV MAFADMMRKK
301: ISMPAHLMYD GRNDNLFDNF SSVAQRLGVY TAKDYADILE FLVGRWKIQD LTGLSGEGNK AQDYLCGLAP RIKRLDERAQ ARAKKGPKIP FSWIHDREVQ
401: L

Arabidopsis Description

FAB2Stearoyl-[acyl-carrier-protein] 9-desaturase 7, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:O22832]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.