Factsheet for GSMUA_Achr5P25160_001

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

nucleus 1
plastid 5
peroxisome 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_Achr5P25190_001	Banana	mitochondrion	16.24	96.97
GSMUA_Achr8P00820_001	Banana	cytosol, nucleus, peroxisome	37.06	89.02
GSMUA_Achr6P27590_001	Banana	nucleus, peroxisome, plastid	32.74	81.65
GSMUA_Achr8P08750_001	Banana	plastid	68.53	76.49
VIT_12s0034g00180.t01	Wine grape	cytosol	20.56	76.42
GSMUA_Achr7P22860_001	Banana	plastid	69.54	75.9
VIT_05s0094g00750.t01	Wine grape	plastid	59.9	73.06
GSMUA_Achr8P32640_001	Banana	cytosol	47.46	68.5
KRH71270	Soybean	endoplasmic reticulum, nucleus	67.26	67.77
Os01t0919900-01	Rice	plastid	68.78	67.75
Zm00001d012033_P002	Maize	mitochondrion	67.26	67.6
EES04113	Sorghum	plastid	68.02	67.51
VIT_00s0499g00030.t01	Wine grape	plastid	67.26	67.43
TraesCS3D01G421700.1	Wheat	plastid	66.5	66.84
TraesCS3B01G463000.1	Wheat	plastid	66.5	66.67
Zm00001d004019_P001	Maize	plastid	66.24	66.58
EES10606	Sorghum	plastid	65.99	66.33
Os04t0379900-01	Rice	plastid	65.48	66.15
Zm00001d025170_P001	Maize	plastid	65.48	65.82
KRH50195	Soybean	plastid	67.01	65.67
VIT_12s0034g00190.t01	Wine grape	extracellular	27.66	65.27
PGSC0003DMT400002555	Potato	plastid	64.72	64.89
TraesCS2B01G298000.1	Wheat	plastid	64.47	64.8
CDY44250	Canola	plastid	65.48	64.66
TraesCS2A01G280700.2	Wheat	plastid	64.21	64.54
CDY17916	Canola	plastid	65.23	64.41
Solyc03g063110.2.1	Tomato	plastid	64.21	64.38
AT2G43710.1	Thale cress	plastid	65.48	64.34
Bra000321.1-P	Field mustard	plastid	64.97	64.32
CDX83464	Canola	plastid	64.97	64.32
Zm00001d042344_P002	Maize	plastid	67.26	64.32
TraesCS2D01G279500.2	Wheat	golgi, plastid	63.96	64.29
GSMUA_Achr6P01210_001	Banana	cytosol, endoplasmic reticulum, extracellular, golgi, peroxisome, plasma membrane, plastid, vacuole	47.46	64.04
CDX79807	Canola	plastid	64.97	63.84
PGSC0003DMT400041874	Potato	plastid	63.45	63.61
Bra004778.1-P	Field mustard	plastid	64.72	63.59
PGSC0003DMT400042118	Potato	plastid	63.96	63.48
Solyc11g008680.1.1	Tomato	plastid	63.2	63.36
Solyc06g053480.2.1	Tomato	plastid	63.71	63.22
GSMUA_Achr7P03060_001	Banana	plastid	48.73	60.95
TraesCS5D01G131500.1	Wheat	plastid	58.63	60.47
TraesCS5A01G123600.2	Wheat	plastid	58.88	60.26
TraesCS5B01G123200.1	Wheat	plastid	58.38	59.74
HORVU5Hr1G039730.1	Barley	plastid	58.12	59.48
Os02t0504800-01	Rice	plastid	48.22	59.01
TraesCS5D01G548700.1	Wheat	plastid	57.11	57.54
HORVU2Hr1G068670.2	Barley	mitochondrion, plastid	64.72	57.3
TraesCS5B01G539600.1	Wheat	plastid	56.85	57.29
KXG30261	Sorghum	plastid	60.15	56.97
HORVU3Hr1G094050.3	Barley	plastid	66.75	56.56
TraesCS4A01G326700.1	Wheat	plastid	57.87	55.75
HORVU5Hr1G123110.1	Barley	mitochondrion, plastid	56.09	55.39
Zm00001d050552_P001	Maize	plastid	60.66	54.32
TraesCS3A01G426800.3	Wheat	plastid	65.99	53.94
GSMUA_Achr5P25180_001	Banana	cytosol	22.08	52.73

Protein Annotations

Gene3D:1.10.620.20	MapMan:5.1.7.1	InterPro:Fatty_acid_desaturase-2	InterPro:Ferritin-like_SF	GO:GO:0003674	GO:GO:0003824
GO:GO:0005488	GO:GO:0006629	GO:GO:0006631	GO:GO:0008150	GO:GO:0008152	GO:GO:0009987
GO:GO:0016491	GO:GO:0045300	GO:GO:0046872	GO:GO:0055114	EnsemblPlantsGene:GSMUA_Achr5G25160_001	EnsemblPlants:GSMUA_Achr5P25160_001
EnsemblPlants:GSMUA_Achr5T25160_001	InterPro:IPR012348	UniProt:M0T1J1	PFAM:PF03405	PIRSF:PIRSF000346	PANTHER:PTHR31155
PANTHER:PTHR31155:SF11	InterPro:RNR-like	SUPFAM:SSF47240	UniParc:UPI000294BA53	:	:

Description

Acyl-[acyl-carrier-protein] desaturase, chloroplastic [Source:GMGC_GENE;Acc:GSMUA_Achr5G25160_001]

Coordinates

chr5:+:26282670..26289624

Molecular Weight (calculated)

44919.9 Da

IEP (calculated)

6.081

GRAVY (calculated)

-0.442

Length

394 amino acids

Sequence
(BLAST)

001: MPLAAPFSLP LLTTKAKKDR PDEHCSVSLP LLRAIFEEEE ETRRVDPMAS RVALLPESFL CLARSRSKRN AVSPRVSMAS TMVKTPKKLF GPRETHIEVT
101: HSMPPQKIEI IKSLDDWVED NILVHLKPVE KCWQPQDFLP DFSSEAFNEE VMELRERSKE LPDEYFVCLV GDMITEEAVP TYQTMLNTSD GVRDETGASL
201: TPWALWIRAW TAEENRHGDL LNKYLYLSGR VDMKQIEKTI QYLIGSGMDP RTENNPYLGF IYTSFQERAT FISHGNTARL AKDHGDLNLA QICGTIASDE
301: KRHETAYTKV VEKLFEVDPD YTVLAFADMM RKKITMPAHL MYDGPGLSGE GNKAQDFVCT LAPKIRQLDE RARGRAKKAP AMPFSWIYNR EVQL

Best Arabidopsis Sequence Match ( AT2G43710.2 )
(BLAST)

001: MALKFNPLVA SQPYKFPSST RPPTPSFRSP KFLCLASSSP ALSSGPKSVE SLKKPFTPPR EVHVQVLHSM PPQKIEIFKS MENWAEENLL IHLKDVEKSW
101: QPQDFLPDPA SDGFEDQVRE LRERARELPD DYFVVLVGDM ITEEALPTYQ TMLNTLDGVR DETGASPTSW AIWTRAWTAE ENRHGDLLNK YLYLSGRVDM
201: RQIEKTIQYL IGSGMDPRTE NNPYLGFIYT SFQERATFIS HGNTARQAKE HGDIKLAQIC GTIAADEKRH ETAYTKIVEK LFEIDPDGTV MAFADMMRKK
301: ISMPAHLMYD GRNDNLFDNF SSVAQRLGVY TAKDYADILE FLVGRWKIQD LTGLSGEGNK AQDYLCGLAP RIKRLDERAQ ARAKKGPKIP FSWIHDREVQ
401: L

Arabidopsis Description

FAB2Stearoyl-[acyl-carrier-protein] 9-desaturase 7, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:O22832]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.