Factsheet for VIT_05s0094g00750.t01

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 9
mitochondrion 1
peroxisome 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
VIT_02s0012g02500.t01	Wine grape	cytosol	16.72	79.41
VIT_12s0034g00180.t01	Wine grape	cytosol	26.01	79.25
VIT_12s0034g00190.t01	Wine grape	extracellular	38.08	73.65
KRH71270	Soybean	endoplasmic reticulum, nucleus	87.0	71.87
GSMUA_Achr7P22860_001	Banana	plastid	79.26	70.91
PGSC0003DMT400042118	Potato	plastid	86.07	70.03
GSMUA_Achr8P08750_001	Banana	plastid	76.16	69.69
Solyc06g053480.2.1	Tomato	plastid	85.45	69.52
GSMUA_Achr8P00820_001	Banana	cytosol, nucleus, peroxisome	35.29	69.51
VIT_00s0499g00030.t01	Wine grape	plastid	84.52	69.47
KRH50195	Soybean	plastid	86.38	69.4
AT2G43710.1	Thale cress	plastid	83.9	67.58
CDY44250	Canola	plastid	82.66	66.92
Bra000321.1-P	Field mustard	plastid	82.04	66.58
CDX83464	Canola	plastid	82.04	66.58
GSMUA_Achr6P27590_001	Banana	nucleus, peroxisome, plastid	32.51	66.46
CDY17916	Canola	plastid	81.73	66.17
CDX79807	Canola	plastid	82.04	66.08
VIT_10s0003g04810.t01	Wine grape	cytosol	24.46	65.83
VIT_05s0094g00730.t01	Wine grape	plastid	73.68	65.75
Bra004778.1-P	Field mustard	plastid	81.11	65.34
VIT_05s0094g00580.t01	Wine grape	plastid	72.14	64.36
Zm00001d012033_P002	Maize	mitochondrion	77.09	63.52
EES04113	Sorghum	plastid	77.71	63.22
Os01t0919900-01	Rice	plastid	78.02	63.0
Os02t0504800-01	Rice	plastid	62.54	62.73
TraesCS3B01G463000.1	Wheat	plastid	75.85	62.34
TraesCS3D01G421700.1	Wheat	plastid	75.54	62.24
Os04t0379900-01	Rice	plastid	74.3	61.54
EES10606	Sorghum	plastid	73.99	60.97
Zm00001d042344_P002	Maize	plastid	77.71	60.92
TraesCS2B01G298000.1	Wheat	plastid	73.68	60.71
TraesCS2A01G280700.2	Wheat	plastid	73.68	60.71
TraesCS2D01G279500.2	Wheat	golgi, plastid	73.37	60.46
Zm00001d004019_P001	Maize	plastid	73.37	60.46
Zm00001d025170_P001	Maize	plastid	73.37	60.46
GSMUA_Achr5P25160_001	Banana	plastid	73.06	59.9
VIT_05s0094g00550.t01	Wine grape	cytosol	47.37	58.62
TraesCS5A01G123600.2	Wheat	plastid	67.18	56.36
TraesCS5D01G131500.1	Wheat	plastid	66.56	56.28
TraesCS5B01G123200.1	Wheat	plastid	66.56	55.84
HORVU5Hr1G039730.1	Barley	plastid	66.25	55.58
VIT_05s0094g00630.t01	Wine grape	plastid	28.79	55.36
VIT_05s0094g00740.t01	Wine grape	plastid	60.68	54.9
TraesCS5D01G548700.1	Wheat	plastid	66.25	54.73
TraesCS5B01G539600.1	Wheat	plastid	65.63	54.22
HORVU2Hr1G068670.2	Barley	mitochondrion, plastid	73.68	53.48
HORVU5Hr1G123110.1	Barley	mitochondrion, plastid	65.33	52.88
HORVU3Hr1G094050.3	Barley	plastid	75.54	52.47
KXG30261	Sorghum	plastid	67.49	52.4
TraesCS4A01G326700.1	Wheat	plastid	65.63	51.83
VIT_18s0001g15460.t01	Wine grape	plastid	62.23	51.67
VIT_05s0094g00650.t01	Wine grape	plastid	64.09	51.36
Zm00001d050552_P001	Maize	plastid	67.8	49.77
TraesCS3A01G426800.3	Wheat	plastid	73.99	49.59
VIT_07s0005g03820.t01	Wine grape	nucleus, peroxisome, plastid	39.63	47.94
VIT_00s0327g00070.t01	Wine grape	cytosol, peroxisome, plastid	8.67	45.9

Protein Annotations

Gene3D:1.10.620.20	MapMan:5.1.7.1	ProteinID:CBI24694	ProteinID:CBI24694.3	UniProt:D7T2G3	EMBL:FN595507
InterPro:Fatty_acid_desaturase-2	InterPro:Ferritin-like_SF	GO:GO:0003674	GO:GO:0003824	GO:GO:0005488	GO:GO:0006629
GO:GO:0006631	GO:GO:0008150	GO:GO:0008152	GO:GO:0009987	GO:GO:0016491	GO:GO:0045300
GO:GO:0046872	GO:GO:0055114	InterPro:IPR012348	PFAM:PF03405	PIRSF:PIRSF000346	PANTHER:PTHR31155
PANTHER:PTHR31155:SF11	InterPro:RNR-like	SUPFAM:SSF47240	UniParc:UPI0001BE2746	ArrayExpress:VIT_05s0094g00750	EnsemblPlantsGene:VIT_05s0094g00750
EnsemblPlants:VIT_05s0094g00750.t01	:	:	:	:	:

Description

No Description!

Coordinates

chr5:+:24075128..24080598

Molecular Weight (calculated)

36963.1 Da

IEP (calculated)

7.129

GRAVY (calculated)

-0.521

Length

323 amino acids

Sequence
(BLAST)

001: MALQLNHLSF QFHKFPSFSL PPMASIRSPT VFMASTLRSG SKEVENLKKP FSPPREVHVQ VTHSMPPQKI EIFKSMENWA EQNILVHLKP VEKSWQPQDF
101: LPDPASDGFH EQVKELRERA KELPDDYFVV LVGDMITEEA LPTYQTMLNT LDGVRDETGA SLTSWAIWTR AWTAEENRHG DLLNKYLYLS GRVDMRQIEK
201: TIQYLIGSGM DPRTENSPYL GFIYTSFQER ATFISHGNTA RHAKEHGDMK LAQICGTIAS DEKRHETAYT KILTGLSGDG RKAQDYVCGL APRFRKLEER
301: AQGRAKEALT IPFSWIFDRE VKL

Best Arabidopsis Sequence Match ( AT2G43710.1 )
(BLAST)

001: MALKFNPLVA SQPYKFPSST RPPTPSFRSP KFLCLASSSP ALSSGPKEVE SLKKPFTPPR EVHVQVLHSM PPQKIEIFKS MENWAEENLL IHLKDVEKSW
101: QPQDFLPDPA SDGFEDQVRE LRERARELPD DYFVVLVGDM ITEEALPTYQ TMLNTLDGVR DETGASPTSW AIWTRAWTAE ENRHGDLLNK YLYLSGRVDM
201: RQIEKTIQYL IGSGMDPRTE NNPYLGFIYT SFQERATFIS HGNTARQAKE HGDIKLAQIC GTIAADEKRH ETAYTKIVEK LFEIDPDGTV MAFADMMRKK
301: ISMPAHLMYD GRNDNLFDNF SSVAQRLGVY TAKDYADILE FLVGRWKIQD LTGLSGEGNK AQDYLCGLAP RIKRLDERAQ ARAKKGPKIP FSWIHDREVQ
401: L

Arabidopsis Description

FAB2Stearoyl-[acyl-carrier-protein] 9-desaturase 7, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:O22832]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.