Factsheet for VIT_05s0094g00740.t01

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 5
cytosol 1
mitochondrion 3
peroxisome 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
VIT_05s0094g00550.t01	Wine grape	cytosol	70.31	96.17
VIT_05s0094g00730.t01	Wine grape	plastid	84.03	82.87
VIT_05s0094g00580.t01	Wine grape	plastid	82.91	81.77
VIT_02s0012g02500.t01	Wine grape	cytosol	14.29	75.0
VIT_00s0327g00070.t01	Wine grape	cytosol, peroxisome, plastid	12.61	73.77
VIT_12s0034g00180.t01	Wine grape	cytosol	20.73	69.81
VIT_05s0094g00650.t01	Wine grape	plastid	72.83	64.52
VIT_00s0499g00030.t01	Wine grape	plastid	70.59	64.12
VIT_12s0034g00190.t01	Wine grape	extracellular	28.57	61.08
VIT_05s0094g00750.t01	Wine grape	plastid	54.9	60.68
CDX74242	Canola	plastid	66.39	59.85
Bra001057.1-P	Field mustard	plastid	66.39	59.85
AT3G02630.1	Thale cress	plastid	66.11	59.6
Bra021427.1-P	Field mustard	plastid	65.83	59.49
CDX92006	Canola	plastid	65.83	59.34
CDX69459	Canola	plastid	65.27	58.69
Bra008631.1-P	Field mustard	plastid	65.27	58.69
CDY26510	Canola	plastid	64.99	58.44
AT5G16240.1	Thale cress	plastid	64.43	58.38
CDY34739	Canola	plastid	42.02	55.15
VIT_18s0001g15460.t01	Wine grape	plastid	59.38	54.5
VIT_10s0003g04810.t01	Wine grape	cytosol	13.17	39.17
VIT_05s0094g00630.t01	Wine grape	plastid	17.93	38.1
VIT_07s0005g03820.t01	Wine grape	nucleus, peroxisome, plastid	28.01	37.45

Protein Annotations

Gene3D:1.10.620.20	MapMan:5.1.7.1	ProteinID:CCB49393	ProteinID:CCB49393.1	UniProt:F6HB24	EMBL:FN595507
InterPro:Fatty_acid_desaturase-2	InterPro:Ferritin-like_SF	GO:GO:0003674	GO:GO:0003824	GO:GO:0005488	GO:GO:0006629
GO:GO:0006631	GO:GO:0008150	GO:GO:0008152	GO:GO:0009987	GO:GO:0016491	GO:GO:0045300
GO:GO:0046872	GO:GO:0055114	InterPro:IPR012348	PFAM:PF03405	PIRSF:PIRSF000346	PANTHER:PTHR31155
PANTHER:PTHR31155:SF9	InterPro:RNR-like	SUPFAM:SSF47240	UniParc:UPI00021095BD	ArrayExpress:VIT_05s0094g00740	EnsemblPlantsGene:VIT_05s0094g00740
EnsemblPlants:VIT_05s0094g00740.t01	:	:	:	:	:

Description

No Description!

Coordinates

chr5:-:24065651..24067464

Molecular Weight (calculated)

41510.6 Da

IEP (calculated)

7.187

GRAVY (calculated)

-0.464

Length

357 amino acids

Sequence
(BLAST)

001: MGYHTSPKFS VASMHRSVSR EVTKKTFSSP HKIQVTHSMP PHKIEIFKSM ENWVEENVLI HLKPVEKYMI TEEALPTYQT QINITDGIRD ETGASPSSWA
101: TWTRAWTAEE NRHGDLLNKY LYLSGRVDMK QIEKTIQYLI RAGMDVQMEN NPYLLFIYTS FQERATFISH GNTARLANQH GDKSLAQICG IIASDEKRHE
201: TAYTKIVEKL FEIDPNGTVL AFADRMRKKI TMPGLLMYDG CDDDLFEHFS AVAQRLGVYT AKDYVDNLEF FVERWNVEKL TGLSSEGRKA QDYVCGLAQR
301: LRKLEERAQE KVKQAPTIPF SWIFDREIYQ VIYKCKPSMF LYLNFNNHDL ISYHFLE

Best Arabidopsis Sequence Match ( AT2G43710.1 )
(BLAST)

001: MALKFNPLVA SQPYKFPSST RPPTPSFRSP KFLCLASSSP ALSSGPKEVE SLKKPFTPPR EVHVQVLHSM PPQKIEIFKS MENWAEENLL IHLKDVEKSW
101: QPQDFLPDPA SDGFEDQVRE LRERARELPD DYFVVLVGDM ITEEALPTYQ TMLNTLDGVR DETGASPTSW AIWTRAWTAE ENRHGDLLNK YLYLSGRVDM
201: RQIEKTIQYL IGSGMDPRTE NNPYLGFIYT SFQERATFIS HGNTARQAKE HGDIKLAQIC GTIAADEKRH ETAYTKIVEK LFEIDPDGTV MAFADMMRKK
301: ISMPAHLMYD GRNDNLFDNF SSVAQRLGVY TAKDYADILE FLVGRWKIQD LTGLSGEGNK AQDYLCGLAP RIKRLDERAQ ARAKKGPKIP FSWIHDREVQ
401: L

Arabidopsis Description

FAB2Stearoyl-[acyl-carrier-protein] 9-desaturase 7, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:O22832]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.