Factsheet for Bra021427.1-P

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 9
mitochondrion 2

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY34739	Canola	plastid	68.61	99.63
Bra001057.1-P	Field mustard	plastid	95.44	95.2
AT3G02630.1	Thale cress	plastid	94.18	93.94
Bra008631.1-P	Field mustard	plastid	83.8	83.38
VIT_05s0094g00550.t01	Wine grape	cytosol	51.14	77.39
VIT_05s0094g00730.t01	Wine grape	plastid	67.59	73.76
Bra000321.1-P	Field mustard	plastid	73.42	72.86
Bra004778.1-P	Field mustard	plastid	73.67	72.57
VIT_05s0094g00580.t01	Wine grape	plastid	65.82	71.82
VIT_05s0094g00740.t01	Wine grape	plastid	59.49	65.83
Bra008632.1-P	Field mustard	plastid	64.56	63.28
Bra039178.1-P	Field mustard	plastid	63.04	63.04
VIT_05s0094g00650.t01	Wine grape	plastid	59.75	58.56
GSMUA_Achr5P25180_001	Banana	cytosol	20.25	48.48
VIT_05s0094g00630.t01	Wine grape	plastid	20.51	48.21

Protein Annotations

Gene3D:1.10.620.20	MapMan:5.1.7.1	EnsemblPlantsGene:Bra021427	EnsemblPlants:Bra021427.1	EnsemblPlants:Bra021427.1-P	InterPro:Fatty_acid_desaturase-2
InterPro:Ferritin-like_SF	GO:GO:0003674	GO:GO:0003824	GO:GO:0005488	GO:GO:0006629	GO:GO:0006631
GO:GO:0008150	GO:GO:0008152	GO:GO:0009987	GO:GO:0016491	GO:GO:0045300	GO:GO:0046872
GO:GO:0055114	InterPro:IPR012348	UniProt:M4DY31	PFAM:PF03405	PIRSF:PIRSF000346	PANTHER:PTHR31155
PANTHER:PTHR31155:SF6	InterPro:RNR-like	SUPFAM:SSF47240	UniParc:UPI0002544AE7	SEG:seg	:

Description

AT3G02630 (E=6e-212) | acyl-(acyl-carrier-protein) desaturase, putative / stearoyl-ACP desaturase, putative

Coordinates

chrA01:+:25253290..25255916

Molecular Weight (calculated)

44927.6 Da

IEP (calculated)

6.203

GRAVY (calculated)

-0.443

Length

395 amino acids

Sequence
(BLAST)

001: MAMAMAMNRI VVLPSSYAYR PHQARGSRSP IASSIRSATT EVTNGRKLYI PPREVHVQVK HSMPPQKLEI FKSLEGWADE TLLTYLKPVE KSWQPTDFLP
101: EAESEGFYDQ VKELRERCKE LPDEYFVVLV GDMITEEALP TYQTMLNTLD GVRDETGASP TPWAVWTRAW TAEENRHGDL LNKYLYLSGR VDMRQIEKTI
201: QYLIGSGMDP KTENNPYLGF IYTSFQERAT FISHGNTARH AKDLGDLKLA QICGTIAADE KRHETAYTKI VEKLFEIDAD GTILGLADMM KKKISMPAHL
301: MYDGQDDNLF EHFSTVAQRL GVYTAKDYAD ILEFLVERWN VETLSGISSE GHKAQDFVCG LPARIRKIEE RAQGRAKEAA KNVPFSWIFG REIRA

Best Arabidopsis Sequence Match ( AT3G02630.1 )
(BLAST)

001: MAMAMDRIVF SPSSYVYRPC QARGSRSSRV SMASTIRSAT TEVTNGRKLY IPPREVHVQV KHSMPPQKLE IFKSLEGWAD ETLLTYLKPV EKSWQPTDFL
101: PEPESEGFYD QVKELRERCK ELPDDYFVVL VGDMITEEAL PTYQTMLNTL DGVRDETGAS PTPWAIWTRA WTAEENRHGD LLNKYLYLSG RVDMRQIEKT
201: IQYLIGSGMD PKTENNPYLG FIYTSFQERA TFISHGNTAR LAKDRGDLKL AQICGTIAAD ERRHETAYTK IVEKLFEIDP DGTILGLADM MKKKISMPAH
301: LMYDGQDDNL FEHFSTVAQR LGVYTAKDYA DILEFLVERW NVETLTDLSS EGHRAQDFVC GLPARIRKIE ERAQGRAKEA AKNIPFSWIF GRNIRA

Arabidopsis Description

S-ACP-DES5Stearoyl-[acyl-carrier-protein] 9-desaturase 5, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q9M879]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.