Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 1
- plastid 2
- peroxisome 1
- mitochondrion 1
- cytosol 2
Predictors | GFP | MS/MS | Papers |
---|---|---|---|
PPI
No PPI Data
Homology
Paralog
locus | Identity | Homology Identity |
---|
Ortholog
locus | Homology Species | Location | Identity | Homology Identity |
---|---|---|---|---|
VIT_05s0094g00630.t01 | Wine grape | plastid | 33.94 | 33.33 |
CDY34739 | Canola | plastid | 42.42 | 25.74 |
GSMUA_Achr7P22860_001 | Banana | plastid | 53.94 | 24.65 |
GSMUA_Achr8P08750_001 | Banana | plastid | 51.52 | 24.08 |
GSMUA_Achr5P25160_001 | Banana | plastid | 52.73 | 22.08 |
AT3G02630.1 | Thale cress | plastid | 50.91 | 21.21 |
CDX69459 | Canola | plastid | 50.3 | 20.91 |
CDY26510 | Canola | plastid | 50.3 | 20.91 |
Bra008631.1-P | Field mustard | plastid | 50.3 | 20.91 |
AT5G16240.1 | Thale cress | plastid | 49.7 | 20.81 |
CDX92006 | Canola | plastid | 49.7 | 20.71 |
GSMUA_Achr8P32640_001 | Banana | cytosol | 33.94 | 20.51 |
CDX74242 | Canola | plastid | 49.09 | 20.45 |
Bra001057.1-P | Field mustard | plastid | 49.09 | 20.45 |
Bra021427.1-P | Field mustard | plastid | 48.48 | 20.25 |
GSMUA_Achr7P03060_001 | Banana | plastid | 35.15 | 18.41 |
GSMUA_Achr6P01210_001 | Banana | cytosol, endoplasmic reticulum, extracellular, golgi, peroxisome, plasma membrane, plastid, vacuole | 31.52 | 17.81 |
GSMUA_Achr8P00820_001 | Banana | cytosol, nucleus, peroxisome | 9.09 | 9.15 |
GSMUA_Achr6P27590_001 | Banana | nucleus, peroxisome, plastid | 8.48 | 8.86 |
GSMUA_Achr5P25190_001 | Banana | mitochondrion | 2.42 | 6.06 |
Protein Annotations
Gene3D:1.10.620.20 | MapMan:5.1.7.1 | InterPro:Fatty_acid_desaturase-2 | InterPro:Ferritin-like_SF | GO:GO:0003674 | GO:GO:0003824 |
GO:GO:0006629 | GO:GO:0006631 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009987 | GO:GO:0016491 |
GO:GO:0045300 | GO:GO:0055114 | EnsemblPlantsGene:GSMUA_Achr5G25180_001 | EnsemblPlants:GSMUA_Achr5P25180_001 | EnsemblPlants:GSMUA_Achr5T25180_001 | InterPro:IPR012348 |
UniProt:M0T1J3 | PFAM:PF03405 | PANTHER:PTHR31155 | PANTHER:PTHR31155:SF6 | InterPro:RNR-like | SUPFAM:SSF47240 |
UniParc:UPI000294A6BA | : | : | : | : | : |
Description
Hypothetical protein [Source:GMGC_GENE;Acc:GSMUA_Achr5G25180_001]
Coordinates
chr5:+:26294318..26294889
Molecular Weight (calculated)
19387.7 Da
IEP (calculated)
5.277
GRAVY (calculated)
-0.175
Length
165 amino acids
Sequence
(BLAST)
(BLAST)
001: MPPQKIEIFK SLEDWAKDNL WVHPRPVEKC WQPQDFLPDS SSEGFYEEVM DLREWSKELP DDFFVCLIGD MITEENVPTY QTIINTNDSV RVLFLDLKEC
101: YICRIPGQRT IPILVLFIPH FRRGVPSFPM GILPGLLKIM GSSIWPRYVE QFHLTKSSMR LLTPR
101: YICRIPGQRT IPILVLFIPH FRRGVPSFPM GILPGLLKIM GSSIWPRYVE QFHLTKSSMR LLTPR
001: MALKFNPLVA SQPYKFPSST RPPTPSFRSP KFLCLASSSP ALSSGPKSVE SLKKPFTPPR EVHVQVLHSM PPQKIEIFKS MENWAEENLL IHLKDVEKSW
101: QPQDFLPDPA SDGFEDQVRE LRERARELPD DYFVVLVGDM ITEEALPTYQ TMLNTLDGVR DETGASPTSW AIWTRAWTAE ENRHGDLLNK YLYLSGRVDM
201: RQIEKTIQYL IGSGMDPRTE NNPYLGFIYT SFQERATFIS HGNTARQAKE HGDIKLAQIC GTIAADEKRH ETAYTKIVEK LFEIDPDGTV MAFADMMRKK
301: ISMPAHLMYD GRNDNLFDNF SSVAQRLGVY TAKDYADILE FLVGRWKIQD LTGLSGEGNK AQDYLCGLAP RIKRLDERAQ ARAKKGPKIP FSWIHDREVQ
401: L
101: QPQDFLPDPA SDGFEDQVRE LRERARELPD DYFVVLVGDM ITEEALPTYQ TMLNTLDGVR DETGASPTSW AIWTRAWTAE ENRHGDLLNK YLYLSGRVDM
201: RQIEKTIQYL IGSGMDPRTE NNPYLGFIYT SFQERATFIS HGNTARQAKE HGDIKLAQIC GTIAADEKRH ETAYTKIVEK LFEIDPDGTV MAFADMMRKK
301: ISMPAHLMYD GRNDNLFDNF SSVAQRLGVY TAKDYADILE FLVGRWKIQD LTGLSGEGNK AQDYLCGLAP RIKRLDERAQ ARAKKGPKIP FSWIHDREVQ
401: L
Arabidopsis Description
FAB2Stearoyl-[acyl-carrier-protein] 9-desaturase 7, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:O22832]
SUBAcon: [plastid]
SUBAcon: [plastid]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.