Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 1
- plastid 2
- peroxisome 1
- mitochondrion 1
- cytosol 2
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| GSMUA_Achr7P03060_001 | Banana | plastid | 90.48 | 78.41 |
| GSMUA_Achr8P00820_001 | Banana | cytosol, nucleus, peroxisome | 41.76 | 69.51 |
| GSMUA_Achr6P27590_001 | Banana | nucleus, peroxisome, plastid | 39.19 | 67.72 |
| KRH15948 | Soybean | cytosol, nucleus | 76.19 | 61.72 |
| EES01858 | Sorghum | mitochondrion, plastid | 84.62 | 60.79 |
| Zm00001d012221_P001 | Maize | plastid | 83.88 | 60.26 |
| Os01t0880800-01 | Rice | plastid | 83.88 | 60.1 |
| VIT_10s0003g04810.t01 | Wine grape | cytosol | 26.37 | 60.0 |
| Solyc06g059700.2.1 | Tomato | cytosol | 31.14 | 59.86 |
| TraesCS3A01G408700.1 | Wheat | mitochondrion, plastid | 82.05 | 59.26 |
| PGSC0003DMT400079078 | Potato | cytoskeleton, peroxisome, plastid | 56.41 | 59.23 |
| GSMUA_Achr5P25190_001 | Banana | mitochondrion | 14.29 | 59.09 |
| HORVU3Hr1G091320.2 | Barley | plastid | 81.69 | 58.99 |
| GSMUA_Achr6P01210_001 | Banana | cytosol, endoplasmic reticulum, extracellular, golgi, peroxisome, plasma membrane, plastid, vacuole | 63.0 | 58.9 |
| TraesCS3D01G403800.1 | Wheat | plastid | 82.05 | 58.64 |
| VIT_18s0001g15460.t01 | Wine grape | plastid | 82.42 | 57.84 |
| AT1G43800.1 | Thale cress | plastid | 79.12 | 55.24 |
| PGSC0003DMT400013389 | Potato | cytosol | 51.28 | 54.05 |
| GSMUA_Achr8P08750_001 | Banana | plastid | 69.6 | 53.82 |
| KRH18113 | Soybean | plastid | 73.63 | 53.17 |
| GSMUA_Achr7P22860_001 | Banana | plastid | 69.96 | 52.91 |
| Solyc01g009960.2.1 | Tomato | plastid | 57.88 | 52.49 |
| Solyc06g054670.1.1 | Tomato | plastid | 69.23 | 49.87 |
| PGSC0003DMT400079076 | Potato | cytosol, peroxisome, plastid | 22.71 | 48.44 |
| PGSC0003DMT400095159 | Potato | plastid | 68.13 | 48.44 |
| PGSC0003DMT400079085 | Potato | plastid | 68.5 | 48.32 |
| KRH18114 | Soybean | cytosol | 65.93 | 48.0 |
| PGSC0003DMT400079075 | Potato | plastid | 68.5 | 47.95 |
| GSMUA_Achr5P25160_001 | Banana | plastid | 68.5 | 47.46 |
| Solyc06g059720.2.1 | Tomato | plastid | 67.03 | 47.29 |
| Solyc06g059710.2.1 | Tomato | plastid | 66.3 | 46.77 |
| VIT_07s0005g03820.t01 | Wine grape | nucleus, peroxisome, plastid | 44.32 | 45.32 |
| PGSC0003DMT400079080 | Potato | plastid | 30.04 | 37.27 |
| GSMUA_Achr5P25180_001 | Banana | cytosol | 20.51 | 33.94 |
Protein Annotations
| Gene3D:1.10.620.20 | MapMan:5.1.7.1 | InterPro:Fatty_acid_desaturase-2 | InterPro:Ferritin-like_SF | GO:GO:0003674 | GO:GO:0003824 |
| GO:GO:0005488 | GO:GO:0006629 | GO:GO:0006631 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009987 |
| GO:GO:0016491 | GO:GO:0045300 | GO:GO:0046872 | GO:GO:0055114 | EnsemblPlantsGene:GSMUA_Achr8G32640_001 | EnsemblPlants:GSMUA_Achr8P32640_001 |
| EnsemblPlants:GSMUA_Achr8T32640_001 | InterPro:IPR012348 | UniProt:M0TVL6 | PFAM:PF03405 | PIRSF:PIRSF000346 | PANTHER:PTHR31155 |
| PANTHER:PTHR31155:SF6 | InterPro:RNR-like | SUPFAM:SSF47240 | UniParc:UPI000296C9C0 | : | : |
Description
Acyl-[acyl-carrier-protein] desaturase, chloroplastic [Source:GMGC_GENE;Acc:GSMUA_Achr8G32640_001]
Coordinates
chr8:-:33982692..33983896
Molecular Weight (calculated)
30773.1 Da
IEP (calculated)
7.569
GRAVY (calculated)
-0.375
Length
273 amino acids
Sequence
(BLAST)
(BLAST)
001: MPPEKVEVFR SLEGWATGAL LPLLKPVRAL RARTAELPDD YFVVLVGDMI TEEALPTYQT MINTLDGVRD ETGASGSPWA VWTRTWTAEE NRHGDLLGKY
101: LYLSGRVDMR MLEKTVQYLI GAGMDPGTEN NPYLGFVYTS FQERATFVSH GNTARLAKER GDSVLARVCG SIAADEKRHE NAYARIIEKL LELDPDGAVL
201: AIADMMRKKI TMPAHLMADG RDPRLGEGRR ARDFVCGLPA RMRRLQERAE DRAKAAEPRR VKFSWIFDRE VTI
101: LYLSGRVDMR MLEKTVQYLI GAGMDPGTEN NPYLGFVYTS FQERATFVSH GNTARLAKER GDSVLARVCG SIAADEKRHE NAYARIIEKL LELDPDGAVL
201: AIADMMRKKI TMPAHLMADG RDPRLGEGRR ARDFVCGLPA RMRRLQERAE DRAKAAEPRR VKFSWIFDRE VTI
001: MLAHKSLLSF TTQWATLMPS PSTFLASRPR GPAKISAVAA PVRPALKHQN KIHTMPPEKM EIFKSLDGWA KDQILPLLKP VDQCWQPASF LPDPALPFSE
101: FTDQVRELRE RTASLPDEYF VVLVGDMITE DALPTYQTMI NTLDGVRDET GASESAWASW TRAWTAEENR HGDLLRTYLY LSGRVDMLMV ERTVQHLIGS
201: GMDPGTENNP YLGFVYTSFQ ERATFVSHGN TARLAKSAGD PVLARICGTI AADEKRHENA YVRIVEKLLE IDPNGAVSAV ADMMRKKITM PAHLMTDGRD
301: PMLFEHFSAV AQRLEVYTAD DYADILEFLV GRWRLEKLEG LTGEGQRAQE FVCGLAQRIR RLQERADERA KKLKKTHEVC FSWIFDKQIS V
101: FTDQVRELRE RTASLPDEYF VVLVGDMITE DALPTYQTMI NTLDGVRDET GASESAWASW TRAWTAEENR HGDLLRTYLY LSGRVDMLMV ERTVQHLIGS
201: GMDPGTENNP YLGFVYTSFQ ERATFVSHGN TARLAKSAGD PVLARICGTI AADEKRHENA YVRIVEKLLE IDPNGAVSAV ADMMRKKITM PAHLMTDGRD
301: PMLFEHFSAV AQRLEVYTAD DYADILEFLV GRWRLEKLEG LTGEGQRAQE FVCGLAQRIR RLQERADERA KKLKKTHEVC FSWIFDKQIS V
Arabidopsis Description
S-ACP-DES6Stearoyl-[acyl-carrier-protein] 9-desaturase 6, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q84VY3]
SUBAcon: [plastid]
SUBAcon: [plastid]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.