Factsheet for GSMUA_Achr7P22860_001

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 8
mitochondrion 2

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_Achr8P00820_001	Banana	cytosol, nucleus, peroxisome	42.11	92.68
GSMUA_Achr6P27590_001	Banana	nucleus, peroxisome, plastid	38.23	87.34
GSMUA_Achr8P08750_001	Banana	plastid	81.44	83.29
VIT_05s0094g00750.t01	Wine grape	plastid	70.91	79.26
VIT_12s0034g00180.t01	Wine grape	cytosol	22.99	78.3
GSMUA_Achr5P25190_001	Banana	mitochondrion	13.85	75.76
KRH71270	Soybean	endoplasmic reticulum, nucleus	78.67	72.63
VIT_00s0499g00030.t01	Wine grape	plastid	78.39	72.01
Os01t0919900-01	Rice	plastid	79.5	71.75
Zm00001d012033_P002	Maize	mitochondrion	77.84	71.68
EES04113	Sorghum	plastid	78.67	71.54
Os04t0379900-01	Rice	plastid	77.01	71.28
KRH50195	Soybean	plastid	78.95	70.9
GSMUA_Achr8P32640_001	Banana	cytosol	52.91	69.96
EES10606	Sorghum	plastid	75.9	69.9
Zm00001d004019_P001	Maize	plastid	75.9	69.9
GSMUA_Achr5P25160_001	Banana	plastid	75.9	69.54
TraesCS3B01G463000.1	Wheat	plastid	75.62	69.47
PGSC0003DMT400002555	Potato	plastid	75.62	69.47
CDY44250	Canola	plastid	76.73	69.42
TraesCS3D01G421700.1	Wheat	plastid	75.35	69.39
CDX79807	Canola	plastid	77.01	69.33
TraesCS2B01G298000.1	Wheat	plastid	75.07	69.13
TraesCS2A01G280700.2	Wheat	plastid	75.07	69.13
Bra000321.1-P	Field mustard	plastid	76.18	69.1
CDX83464	Canola	plastid	76.18	69.1
Bra004778.1-P	Field mustard	plastid	76.73	69.08
AT2G43710.1	Thale cress	plastid	76.73	69.08
Solyc03g063110.2.1	Tomato	plastid	75.07	68.96
CDY17916	Canola	plastid	76.18	68.92
Zm00001d025170_P001	Maize	plastid	74.79	68.88
Solyc06g053480.2.1	Tomato	plastid	75.62	68.77
TraesCS2D01G279500.2	Wheat	golgi, plastid	74.52	68.62
PGSC0003DMT400042118	Potato	plastid	75.35	68.51
Zm00001d042344_P002	Maize	plastid	77.84	68.2
PGSC0003DMT400041874	Potato	plastid	73.96	67.94
Solyc11g008680.1.1	Tomato	plastid	73.41	67.43
VIT_12s0034g00190.t01	Wine grape	extracellular	31.02	67.07
GSMUA_Achr6P01210_001	Banana	cytosol, endoplasmic reticulum, extracellular, golgi, peroxisome, plasma membrane, plastid, vacuole	53.19	65.75
TraesCS5A01G123600.2	Wheat	plastid	67.59	63.38
TraesCS5D01G131500.1	Wheat	plastid	67.04	63.35
HORVU5Hr1G039730.1	Barley	plastid	66.76	62.6
TraesCS5B01G123200.1	Wheat	plastid	66.48	62.34
GSMUA_Achr7P03060_001	Banana	plastid	53.74	61.59
Os02t0504800-01	Rice	plastid	54.85	61.49
TraesCS5D01G548700.1	Wheat	plastid	66.2	61.13
HORVU2Hr1G068670.2	Barley	mitochondrion, plastid	75.07	60.9
TraesCS5B01G539600.1	Wheat	plastid	65.65	60.61
HORVU3Hr1G094050.3	Barley	plastid	75.62	58.71
HORVU5Hr1G123110.1	Barley	mitochondrion, plastid	64.82	58.65
TraesCS4A01G326700.1	Wheat	plastid	66.2	58.44
KXG30261	Sorghum	plastid	65.93	57.21
TraesCS3A01G426800.3	Wheat	plastid	73.96	55.39
Zm00001d050552_P001	Maize	plastid	66.2	54.32
GSMUA_Achr5P25180_001	Banana	cytosol	24.65	53.94

Protein Annotations

Gene3D:1.10.620.20	MapMan:5.1.7.1	InterPro:Fatty_acid_desaturase-2	InterPro:Ferritin-like_SF	GO:GO:0003674	GO:GO:0003824
GO:GO:0005488	GO:GO:0006629	GO:GO:0006631	GO:GO:0008150	GO:GO:0008152	GO:GO:0009987
GO:GO:0016491	GO:GO:0045300	GO:GO:0046872	GO:GO:0055114	EnsemblPlantsGene:GSMUA_Achr7G22860_001	EnsemblPlants:GSMUA_Achr7P22860_001
EnsemblPlants:GSMUA_Achr7T22860_001	InterPro:IPR012348	UniProt:M0TJX2	PFAM:PF03405	PIRSF:PIRSF000346	PANTHER:PTHR31155
PANTHER:PTHR31155:SF11	InterPro:RNR-like	SUPFAM:SSF47240	UniParc:UPI0002955611	SEG:seg	:

Description

Acyl-[acyl-carrier-protein] desaturase, chloroplastic [Source:GMGC_GENE;Acc:GSMUA_Achr7G22860_001]

Coordinates

chr7:-:25234700..25238862

Molecular Weight (calculated)

40869.8 Da

IEP (calculated)

7.529

GRAVY (calculated)

-0.485

Length

361 amino acids

Sequence
(BLAST)

001: MASRMAFRPQ ALPCFSCPSK RRNARSPRVS MASTVGSSSS SAVSNKVETP KKPFSQQDVH SQVTHSLPPQ KIEIFKSLED WAENNILVHL KPVEKCWQPQ
101: DFLPDPSSEG FYEEVKELRE RSKEIPDDYF VCLVGDMITE EALPTYQTML NTLDGVRDET GASPTSWAIW TRAWTAEENR HGDLLNKYLY LSGRVDMKQI
201: EKTIQYLIGS GMDPRTENNP YLGFIYTSFQ ERATFVSHGN TARLAKEHGD LKLAQICGII ASDEKRHETA YTKIVEKLFE IDPNGTVLAF SDMMKKKISM
301: PAHLMWKIGD LTGLSGEGNK AQDFVCTLAP RIRRLEERAQ ARAKQAPAIP FSWIYGREVL L

Best Arabidopsis Sequence Match ( AT2G43710.1 )
(BLAST)

001: MALKFNPLVA SQPYKFPSST RPPTPSFRSP KFLCLASSSP ALSSGPKEVE SLKKPFTPPR EVHVQVLHSM PPQKIEIFKS MENWAEENLL IHLKDVEKSW
101: QPQDFLPDPA SDGFEDQVRE LRERARELPD DYFVVLVGDM ITEEALPTYQ TMLNTLDGVR DETGASPTSW AIWTRAWTAE ENRHGDLLNK YLYLSGRVDM
201: RQIEKTIQYL IGSGMDPRTE NNPYLGFIYT SFQERATFIS HGNTARQAKE HGDIKLAQIC GTIAADEKRH ETAYTKIVEK LFEIDPDGTV MAFADMMRKK
301: ISMPAHLMYD GRNDNLFDNF SSVAQRLGVY TAKDYADILE FLVGRWKIQD LTGLSGEGNK AQDYLCGLAP RIKRLDERAQ ARAKKGPKIP FSWIHDREVQ
401: L

Arabidopsis Description

FAB2Stearoyl-[acyl-carrier-protein] 9-desaturase 7, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:O22832]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.