CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 8
mitochondrion 3

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d012033_P002	Maize	mitochondrion	95.47	96.68
Zm00001d042344_P002	Maize	plastid	95.47	91.99
Os01t0919900-01	Rice	plastid	91.44	90.75
GSMUA_Achr8P00820_001	Banana	cytosol, nucleus, peroxisome	36.52	88.41
TraesCS3D01G421700.1	Wheat	plastid	87.15	88.27
TraesCS3B01G463000.1	Wheat	plastid	87.15	88.04
GSMUA_Achr6P27590_001	Banana	nucleus, peroxisome, plastid	31.99	80.38
KRH71270	Soybean	endoplasmic reticulum, nucleus	77.83	79.03
GSMUA_Achr7P22860_001	Banana	plastid	71.54	78.67
CDY44250	Canola	plastid	78.34	77.94
Solyc06g053480.2.1	Tomato	plastid	77.83	77.83
CDX79807	Canola	plastid	78.59	77.81
VIT_05s0094g00750.t01	Wine grape	plastid	63.22	77.71
GSMUA_Achr8P08750_001	Banana	plastid	69.02	77.62
VIT_00s0499g00030.t01	Wine grape	plastid	76.83	77.61
Bra004778.1-P	Field mustard	plastid	78.34	77.56
EES10606	Sorghum	plastid	76.57	77.55
Bra000321.1-P	Field mustard	plastid	77.58	77.39
CDX83464	Canola	plastid	77.58	77.39
CDY17916	Canola	plastid	77.58	77.19
PGSC0003DMT400042118	Potato	plastid	77.08	77.08
KRH50195	Soybean	plastid	77.83	76.87
AT2G43710.1	Thale cress	plastid	77.58	76.81
Solyc03g063110.2.1	Tomato	plastid	75.57	76.34
PGSC0003DMT400002555	Potato	plastid	75.57	76.34
VIT_12s0034g00180.t01	Wine grape	cytosol	19.9	74.53
HORVU3Hr1G094050.3	Barley	plastid	86.9	74.19
PGSC0003DMT400041874	Potato	plastid	72.8	73.54
Solyc11g008680.1.1	Tomato	plastid	72.54	73.28
TraesCS3A01G426800.3	Wheat	plastid	83.88	69.09
GSMUA_Achr5P25160_001	Banana	plastid	67.51	68.02
KXG30261	Sorghum	plastid	68.77	65.62
VIT_12s0034g00190.t01	Wine grape	extracellular	27.2	64.67
EES01858	Sorghum	mitochondrion, plastid	60.45	63.16
KXG38794	Sorghum	plastid	51.39	51.39
EER88838	Sorghum	plastid	45.59	44.15
KXG24679	Sorghum	plastid	46.85	43.97
KXG35977	Sorghum	plastid	45.34	43.48
OQU92381	Sorghum	plastid	48.36	42.76
EER91728	Sorghum	mitochondrion, plastid	43.58	40.33
OQU85014	Sorghum	plastid, vacuole	26.2	27.59

Protein Annotations

Gene3D:1.10.620.20	MapMan:5.1.7.1	EntrezGene:8059364	UniProt:C5XG99	EnsemblPlants:EES04113	ProteinID:EES04113
ProteinID:EES04113.1	InterPro:Fatty_acid_desaturase-2	InterPro:Ferritin-like_SF	GO:GO:0003674	GO:GO:0003824	GO:GO:0005488
GO:GO:0006629	GO:GO:0006631	GO:GO:0008150	GO:GO:0008152	GO:GO:0009987	GO:GO:0016491
GO:GO:0045300	GO:GO:0046872	GO:GO:0055114	InterPro:IPR012348	PFAM:PF03405	PIRSF:PIRSF000346
PANTHER:PTHR31155	PANTHER:PTHR31155:SF11	InterPro:RNR-like	EnsemblPlantsGene:SORBI_3003G404000	SUPFAM:SSF47240	unigene:Sbi.394
UniParc:UPI000189D891	RefSeq:XP_002458993.1	SEG:seg	:	:	:

Description

hypothetical protein

Coordinates

chr3:-:71173869..71178692

Molecular Weight (calculated)

45096.9 Da

IEP (calculated)

6.905

GRAVY (calculated)

-0.433

Length

397 amino acids

Sequence
(BLAST)

001: MALRLNDVAL CLSPPLAARR RRHCRSGGGS RFVAVASMTS AVSTKLENKK PFAPPREVHV QVTHSMPPQK IEIFKSLDDW ARDNILTHLK PVEKCWQPQD
101: FLPDPSSEGF HDEVKELRER AKEIPDDYFV CLVGDMITEE ALPTYQTMLN TLDGVRDETG ASPTAWAVWT RAWTAEENRH GDLLNKYMYL TGRVDMRQIE
201: KTIQYLIGSG MDPRTENNPY LGFIYTSFQE RATFISHGNT ARHAKDFGDL KLAQICGIIA SDEKRHETAY TKIVEKLFEI DPDGTVVALA DMMKKKIAMP
301: AHLMFDGQDD KLFEHFSMVA QRLGVYTARD YADILEFLVD RWKVADLTGL SGEGNKAQDY LCTLASRIRK LDERAQSRAK KAGTLPFSWV YGREVQL

Best Arabidopsis Sequence Match ( AT2G43710.2 )
(BLAST)

001: MALKFNPLVA SQPYKFPSST RPPTPSFRSP KFLCLASSSP ALSSGPKSVE SLKKPFTPPR EVHVQVLHSM PPQKIEIFKS MENWAEENLL IHLKDVEKSW
101: QPQDFLPDPA SDGFEDQVRE LRERARELPD DYFVVLVGDM ITEEALPTYQ TMLNTLDGVR DETGASPTSW AIWTRAWTAE ENRHGDLLNK YLYLSGRVDM
201: RQIEKTIQYL IGSGMDPRTE NNPYLGFIYT SFQERATFIS HGNTARQAKE HGDIKLAQIC GTIAADEKRH ETAYTKIVEK LFEIDPDGTV MAFADMMRKK
301: ISMPAHLMYD GRNDNLFDNF SSVAQRLGVY TAKDYADILE FLVGRWKIQD LTGLSGEGNK AQDYLCGLAP RIKRLDERAQ ARAKKGPKIP FSWIHDREVQ
401: L

Arabidopsis Description

FAB2Stearoyl-[acyl-carrier-protein] 9-desaturase 7, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:O22832]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.