CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 11

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d030165_P001	Maize	cytosol	75.82	89.58
GSMUA_Achr6P01210_001	Banana	cytosol, endoplasmic reticulum, extracellular, golgi, peroxisome, plasma membrane, plastid, vacuole	41.56	56.51
EES01858	Sorghum	mitochondrion, plastid	49.37	51.58
EES04113	Sorghum	plastid	51.39	51.39
EES10606	Sorghum	plastid	49.37	50.0
Bra039178.1-P	Field mustard	plastid	48.36	48.61
AT3G02610.2	Thale cress	plastid	49.37	47.46
AT5G16230.1	Thale cress	plastid	47.86	47.38
CDY57537	Canola	plastid	48.61	47.19
CDY26509	Canola	plastid	47.86	47.15
AT3G02620.2	Thale cress	plastid	48.11	47.04
CDX69460	Canola	plastid	47.61	46.9
Bra008632.1-P	Field mustard	plastid	47.61	46.9
KXG24679	Sorghum	plastid	49.87	46.81
CDY43232	Canola	plastid	48.11	46.7
KXG30261	Sorghum	plastid	48.87	46.63
EER88838	Sorghum	plastid	48.11	46.59
KXG35977	Sorghum	plastid	47.86	45.89
GSMUA_Achr5P25190_001	Banana	mitochondrion	7.56	45.45
OQU92381	Sorghum	plastid	50.88	44.99
EER91728	Sorghum	mitochondrion, plastid	48.11	44.52
PGSC0003DMT400041719	Potato	cytosol, peroxisome, plastid	15.11	41.1
OQU85014	Sorghum	plastid, vacuole	23.43	24.67

Protein Annotations

Gene3D:1.10.620.20	MapMan:5.1.7.1	UniProt:A0A1B6QLK5	InterPro:FADS-2_CS	InterPro:Fatty_acid_desaturase-2	InterPro:Ferritin-like_SF
GO:GO:0003674	GO:GO:0003824	GO:GO:0005488	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623
GO:GO:0005737	GO:GO:0006629	GO:GO:0006631	GO:GO:0006633	GO:GO:0008150	GO:GO:0008152
GO:GO:0009058	GO:GO:0009507	GO:GO:0009536	GO:GO:0009987	GO:GO:0016491	GO:GO:0045300
GO:GO:0046872	GO:GO:0055114	InterPro:IPR012348	EnsemblPlants:KXG38794	ProteinID:KXG38794	ProteinID:KXG38794.1
ProteinID:KXG38796.1	PFAM:PF03405	PIRSF:PIRSF000346	ScanProsite:PS00574	PANTHER:PTHR31155	InterPro:RNR-like
EnsemblPlantsGene:SORBI_3001G280700	SUPFAM:SSF47240	UniParc:UPI0002207011	SEG:seg	:	:

Description

hypothetical protein

Coordinates

chr1:-:54998953..55000977

Molecular Weight (calculated)

44745.0 Da

IEP (calculated)

7.613

GRAVY (calculated)

-0.421

Length

397 amino acids

Sequence
(BLAST)

001: MVMMSGLAAA YSVTPTGTAP SSCWKTRAPQ PRVAFQRRRR TTSLTTATAT ATAMPREAMT APEKADVLRS LDGWAESNLL PLLKPVDRSW QPHDLLPDSA
101: SPGFHEEVDE LRARAREIPD DYYVCLVGNM VTEEALPTYH AALNSFVGYD SPSSADAWSR WSRGWTAEEN RHGDLLNRYL YLSGRVDMRR VEQTIHHLIT
201: AGMRLAVDKC PYRGFIYTSF QERATAISHG NTAARAKALG DASLARICGA IAGDEKRHEA AYTRVVDELF ARTPDAAVRA LEYMMRQRIL MPAYYMFDGK
301: DTDLFHNYSA VAQRLGVYTT ADYADLVEFF VDRWGVAELG PGLTGEGRQA QDYLCRLPER VRKMAELDAR RRQQPLHLQP RQAPFSWVFD RQVELQA

Best Arabidopsis Sequence Match ( AT2G43710.2 )
(BLAST)

001: MALKFNPLVA SQPYKFPSST RPPTPSFRSP KFLCLASSSP ALSSGPKSVE SLKKPFTPPR EVHVQVLHSM PPQKIEIFKS MENWAEENLL IHLKDVEKSW
101: QPQDFLPDPA SDGFEDQVRE LRERARELPD DYFVVLVGDM ITEEALPTYQ TMLNTLDGVR DETGASPTSW AIWTRAWTAE ENRHGDLLNK YLYLSGRVDM
201: RQIEKTIQYL IGSGMDPRTE NNPYLGFIYT SFQERATFIS HGNTARQAKE HGDIKLAQIC GTIAADEKRH ETAYTKIVEK LFEIDPDGTV MAFADMMRKK
301: ISMPAHLMYD GRNDNLFDNF SSVAQRLGVY TAKDYADILE FLVGRWKIQD LTGLSGEGNK AQDYLCGLAP RIKRLDERAQ ARAKKGPKIP FSWIHDREVQ
401: L

Arabidopsis Description

FAB2Stearoyl-[acyl-carrier-protein] 9-desaturase 7, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:O22832]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.