Factsheet for Zm00001d030165_P001

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KXG38794	Sorghum	plastid	89.58	75.82
GSMUA_Achr6P01210_001	Banana	cytosol, endoplasmic reticulum, extracellular, golgi, peroxisome, plasma membrane, plastid, vacuole	47.32	54.45
Zm00001d012221_P001	Maize	plastid	58.63	51.84
Zm00001d012033_P002	Maize	mitochondrion	57.74	49.49
Zm00001d025170_P001	Maize	plastid	56.85	48.72
Zm00001d004019_P001	Maize	plastid	56.55	48.47
Bra039178.1-P	Field mustard	plastid	55.95	47.59
CDY26509	Canola	plastid	56.85	47.39
Bra008632.1-P	Field mustard	plastid	56.55	47.15
CDX69460	Canola	plastid	56.55	47.15
GSMUA_Achr5P25190_001	Banana	mitochondrion	9.23	46.97
Zm00001d021059_P001	Maize	plastid	57.14	46.94
AT5G16230.1	Thale cress	plastid	55.95	46.88
Zm00001d042344_P002	Maize	plastid	57.44	46.84
Zm00001d014498_P001	Maize	plastid	56.55	46.57
AT3G02610.2	Thale cress	plastid	57.14	46.49
AT3G02620.2	Thale cress	plastid	55.95	46.31
Zm00001d024273_P001	Maize	plastid	58.04	45.99
CDY57537	Canola	plastid	55.95	45.97
CDY43232	Canola	plastid	55.65	45.72
Zm00001d050552_P001	Maize	plastid	53.87	41.14
Zm00001d030328_P001	Maize	mitochondrion	52.98	41.01
PGSC0003DMT400041719	Potato	cytosol, peroxisome, plastid	17.26	39.73
Zm00001d025262_P001	Maize	mitochondrion, plastid	19.64	15.57

Protein Annotations

Gene3D:1.10.620.20	MapMan:5.1.7.1	UniProt:A0A1D6KAN3	InterPro:Fatty_acid_desaturase-2	InterPro:Ferritin-like_SF	GO:GO:0003674
GO:GO:0003824	GO:GO:0005488	GO:GO:0006629	GO:GO:0006631	GO:GO:0008150	GO:GO:0008152
GO:GO:0009987	GO:GO:0016491	GO:GO:0045300	GO:GO:0046872	GO:GO:0055114	InterPro:IPR012348
ProteinID:ONM00481.1	PFAM:PF03405	PIRSF:PIRSF000346	PANTHER:PTHR31155	InterPro:RNR-like	SUPFAM:SSF47240
UniParc:UPI000843F7F0	EnsemblPlantsGene:Zm00001d030165	EnsemblPlants:Zm00001d030165_P001	EnsemblPlants:Zm00001d030165_T001	:	:

Description

stearoyl-acyl-carrier-protein desaturase3Stearoyl-[acyl-carrier-protein] 9-desaturase 7 chloroplastic

Coordinates

chr1:-:109910640..109911650

Molecular Weight (calculated)

38317.4 Da

IEP (calculated)

6.604

GRAVY (calculated)

-0.385

Length

336 amino acids

Sequence
(BLAST)

001: MTAPEKADVL RSLDGWAESN LLPLLKPVER AWQPHDLLPD SASPGFREAV DELRARAREI PDDYYVCLVG NMVTEEALPT YHAALNSFVG YDSPSSADAW
101: ARWSRGWTAE ENRHGDLLNR YLYLCGRVDV RRVEQTIHHL INAGMRLASD KCPYRGFIYT AFQERATAVS HGNTARRAMA LGDASLARIC GAIASDEKRH
201: EAAYTRVVDQ LFALTPDAAV RALEYMMRER ILMPAYYMFD GRDPDLFRHY AAVAQRLGVY TTADYADLVQ FFVDRWGVAD LGPGLTGEGR QAQDYVCRLP
301: ERVRRMDQLD ARRRLQPQTR QVPFSWLFDR HVELLT

Best Arabidopsis Sequence Match ( AT2G43710.1 )
(BLAST)

001: MALKFNPLVA SQPYKFPSST RPPTPSFRSP KFLCLASSSP ALSSGPKEVE SLKKPFTPPR EVHVQVLHSM PPQKIEIFKS MENWAEENLL IHLKDVEKSW
101: QPQDFLPDPA SDGFEDQVRE LRERARELPD DYFVVLVGDM ITEEALPTYQ TMLNTLDGVR DETGASPTSW AIWTRAWTAE ENRHGDLLNK YLYLSGRVDM
201: RQIEKTIQYL IGSGMDPRTE NNPYLGFIYT SFQERATFIS HGNTARQAKE HGDIKLAQIC GTIAADEKRH ETAYTKIVEK LFEIDPDGTV MAFADMMRKK
301: ISMPAHLMYD GRNDNLFDNF SSVAQRLGVY TAKDYADILE FLVGRWKIQD LTGLSGEGNK AQDYLCGLAP RIKRLDERAQ ARAKKGPKIP FSWIHDREVQ
401: L

Arabidopsis Description

FAB2Stearoyl-[acyl-carrier-protein] 9-desaturase 7, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:O22832]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.