Factsheet for Zm00001d024273_P001

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 6
nucleus 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KXG24679	Sorghum	plastid	86.32	86.52
HORVU7Hr1G040140.1	Barley	cytosol, nucleus, peroxisome	62.26	82.24
TraesCS7A01G196500.1	Wheat	plastid	69.81	72.91
TraesCS7B01G102300.1	Wheat	plastid	69.1	71.99
Os08t0200100-01	Rice	plastid	66.98	70.3
TraesCS2D01G074000.1	Wheat	plastid	62.74	65.68
TraesCS2D01G074200.1	Wheat	mitochondrion, plastid	63.21	59.69
Zm00001d030328_P001	Maize	mitochondrion	60.61	59.22
TraesCS2D01G074100.1	Wheat	mitochondrion	63.44	58.99
GSMUA_Achr6P01210_001	Banana	cytosol, endoplasmic reticulum, extracellular, golgi, peroxisome, plasma membrane, plastid, vacuole	40.09	58.22
Zm00001d030165_P001	Maize	cytosol	45.99	58.04
GSMUA_Achr5P25190_001	Banana	mitochondrion	8.96	57.58
Zm00001d012221_P001	Maize	plastid	48.82	54.47
Os03t0741000-00	Rice	plastid	35.85	50.67
Zm00001d025170_P001	Maize	plastid	46.46	50.26
Zm00001d004019_P001	Maize	plastid	46.46	50.26
Zm00001d012033_P002	Maize	mitochondrion	46.23	50.0
AT3G02610.2	Thale cress	plastid	48.35	49.64
Zm00001d021059_P001	Maize	plastid	47.88	49.63
Bra008632.1-P	Field mustard	plastid	46.93	49.38
CDX69460	Canola	plastid	46.93	49.38
CDY26509	Canola	plastid	46.93	49.38
AT5G16230.1	Thale cress	plastid	46.7	49.38
Bra039178.1-P	Field mustard	plastid	45.99	49.37
AT3G02620.2	Thale cress	plastid	46.93	49.01
Zm00001d042344_P002	Maize	plastid	46.93	48.3
Zm00001d014498_P001	Maize	plastid	46.46	48.28
CDY57537	Canola	plastid	46.23	47.92
CDY43232	Canola	plastid	45.99	47.68
Os06t0503800-00	Rice	plastid	26.42	45.9
Zm00001d050552_P001	Maize	plastid	46.93	45.23
PGSC0003DMT400041719	Potato	cytosol, peroxisome, plastid	14.39	41.78
Zm00001d025262_P001	Maize	mitochondrion, plastid	17.22	17.22

Protein Annotations

Gene3D:1.10.620.20	EntrezGene:100382139	MapMan:5.1.7.1	ProteinID:AQK40925.1	EMBL:BT061072	UniProt:C0HFG6
InterPro:Fatty_acid_desaturase-2	InterPro:Ferritin-like_SF	GO:GO:0003674	GO:GO:0003824	GO:GO:0005488	GO:GO:0006629
GO:GO:0006631	GO:GO:0008150	GO:GO:0008152	GO:GO:0009987	GO:GO:0016491	GO:GO:0045300
GO:GO:0046872	GO:GO:0055114	InterPro:IPR012348	PFAM:PF03405	PIRSF:PIRSF000346	PANTHER:PTHR31155
PANTHER:PTHR31155:SF10	InterPro:RNR-like	SUPFAM:SSF47240	UniParc:UPI00000496DB	EnsemblPlantsGene:Zm00001d024273	EnsemblPlants:Zm00001d024273_P001
EnsemblPlants:Zm00001d024273_T001	SEG:seg	:	:	:	:

Description

stearoyl-acyl-carrier-protein desaturase10 stearoyl-acyl-carrier-protein desaturase10

Coordinates

chr10:+:60915073..60917622

Molecular Weight (calculated)

47461.6 Da

IEP (calculated)

8.183

GRAVY (calculated)

-0.352

Length

424 amino acids

Sequence
(BLAST)

001: MAATTPLLAV AGHGVSYKPA NAKDSYYCFK FASSARTRVT LPQIIHWRCR SSHSSTGTTT MAVPVLKRRE KQDEEQEWMG YLAPEKLEVL AHLEPWAEAH
101: VLPLLKPAEE AWQPSDMLPD PAALGDEGFH DACRELRARA ASVPDAHLVC LVGNMITEEA LPTYQSVPNR FEAVRDLTGA DSTAWARWIR GWSAEENRHG
201: DALSHYMYLS GRVDMRQVDR TVHRLIASGM AMNAARSPYH GFIYVAFQER ATAISHGNMA RHVGAHGDHV LARVCGAIMA DEKRHETAYT RIVAKLFEVD
301: PDAAVRALGY MMRHRITMPA ALMTDGRDAH LYAHYAAAAQ QTGVYTASDY RSILEHLIRQ WRVEELAAGL SGEGRRARDY VCGLPHKIRR MEEKAHDRAA
401: QTQKKPTSVP FSWIFDRSVN VVIP

Best Arabidopsis Sequence Match ( AT3G02610.1 )
(BLAST)

001: MALLLNSTIT VAMKQNPLVA VSFPRTTCLG SSFSPPRLLR VSCVATNPSK TSEETDKKKF RPIKEVPNQV THTITQEKLE IFKSMENWAQ ENLLSYLKPV
101: EASWQPQDFL PETNDEDRFY EQVKELRDRT KEIPDDYFVV LVGDMITEEA LPTYQTTLNT LDGVKDETGG SLTPWAVWVR AWTAEENRHG DLLNKYLYLS
201: GRVDMRHVEK TIQYLIGSGM DSKFENNPYN GFIYTSFQER ATFISHGNTA KLATTYGDTT LAKICGTIAA DEKRHETAYT RIVEKLFEID PDGTVQALAS
301: MMRKRITMPA HLMHDGRDDD LFDHYAAVAQ RIGVYTATDY AGILEFLLRR WEVEKLGMGL SGEGRRAQDY LCTLPQRIRR LEERANDRVK LASKSKPSVS
401: FSWIYGREVE L

Arabidopsis Description

Plant stearoyl-acyl-carrier desaturase family protein [Source:UniProtKB/TrEMBL;Acc:A0A178V7P2]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.