Factsheet for TraesCS7B01G102300.1

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 5
mitochondrion 2
peroxisome 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS7A01G196500.1	Wheat	plastid	96.07	96.31
HORVU7Hr1G040140.1	Barley	cytosol, nucleus, peroxisome	74.94	95.02
Os08t0200100-01	Rice	plastid	78.13	78.71
KXG24679	Sorghum	plastid	72.97	70.21
Zm00001d024273_P001	Maize	plastid	71.99	69.1
TraesCS2B01G090400.1	Wheat	mitochondrion	66.34	60.0
GSMUA_Achr6P01210_001	Banana	cytosol, endoplasmic reticulum, extracellular, golgi, peroxisome, plasma membrane, plastid, vacuole	42.01	58.56
TraesCS2B01G090700.1	Wheat	plastid	56.02	57.43
GSMUA_Achr5P25190_001	Banana	mitochondrion	9.09	56.06
Os03t0741000-00	Rice	plastid	39.56	53.67
TraesCS3B01G453200.2	Wheat	mitochondrion, plastid	53.32	51.79
TraesCS5B01G235800.1	Wheat	plastid	50.86	51.49
TraesCS5B01G123200.1	Wheat	plastid	47.67	50.39
TraesCS2B01G298000.1	Wheat	plastid	48.4	50.26
TraesCS3B01G463000.1	Wheat	plastid	48.16	49.87
TraesCS5B01G235900.1	Wheat	plastid	49.63	49.63
Os06t0503800-00	Rice	plastid	29.73	49.59
AT5G16230.1	Thale cress	plastid	48.65	49.38
CDY26509	Canola	plastid	48.65	49.13
CDX69460	Canola	plastid	48.65	49.13
Bra008632.1-P	Field mustard	plastid	48.65	49.13
AT3G02620.2	Thale cress	plastid	48.4	48.52
AT3G02610.2	Thale cress	plastid	49.14	48.43
TraesCS5B01G539600.1	Wheat	plastid	46.44	48.34
Bra039178.1-P	Field mustard	plastid	46.68	48.1
CDY57537	Canola	plastid	47.17	46.94
CDY43232	Canola	plastid	46.93	46.7
PGSC0003DMT400041719	Potato	cytosol, peroxisome, plastid	14.74	41.1

Protein Annotations

Gene3D:1.10.620.20	MapMan:5.1.7.1	InterPro:Fatty_acid_desaturase-2	InterPro:Ferritin-like_SF	GO:GO:0003674	GO:GO:0003824
GO:GO:0006629	GO:GO:0006631	GO:GO:0008150	GO:GO:0008152	GO:GO:0009987	GO:GO:0016491
GO:GO:0045300	GO:GO:0055114	InterPro:IPR012348	PFAM:PF03405	PIRSF:PIRSF000346	PANTHER:PTHR31155
PANTHER:PTHR31155:SF10	InterPro:RNR-like	SUPFAM:SSF47240	EnsemblPlantsGene:TraesCS7B01G102300	EnsemblPlants:TraesCS7B01G102300.1	TIGR:cd01050
SEG:seg	:	:	:	:	:

Description

No Description!

Coordinates

chr7B:+:116493008..116494342

Molecular Weight (calculated)

45248.8 Da

IEP (calculated)

7.566

GRAVY (calculated)

-0.404

Length

407 amino acids

Sequence
(BLAST)

001: MATAATAVKM SPRSTGYPSS CKPSNTSCYC KPPAAAPMST LRCRSAVSSR GGPTAGRREE EEEWRRYLAP ERLEVLAQLE PWAEANMLPL LKPVDEAWQP
101: ADMLPDAAAL GADGFQAACI ELRARAEGVP DPHLVCLVGN MVTEEALPTY QSMSNRFEGT RDATGADGTA WARWIRGWSA EENRHGDVLS RYMYLSGRLD
201: MRQVERTVHR LIASGMAMHA PASPYHGFIY VAFQERATSI SHGNTARQVR AHGDAALARI CGAIASDEKR HEAAYTRVVA KLFEVDPDAA VRAMEYMMRR
301: RITMPAALMD DGRDADLFAH YAAAAQQAGV YTASDYRGIL EHLIRQWRVE ELSTGLSGEG RRARDYVCAL PEKIRRMEER AHDRVRKEPT PVPFSWIFDR
401: PVSVVLH

Best Arabidopsis Sequence Match ( AT3G02610.1 )
(BLAST)

001: MALLLNSTIT VAMKQNPLVA VSFPRTTCLG SSFSPPRLLR VSCVATNPSK TSEETDKKKF RPIKEVPNQV THTITQEKLE IFKSMENWAQ ENLLSYLKPV
101: EASWQPQDFL PETNDEDRFY EQVKELRDRT KEIPDDYFVV LVGDMITEEA LPTYQTTLNT LDGVKDETGG SLTPWAVWVR AWTAEENRHG DLLNKYLYLS
201: GRVDMRHVEK TIQYLIGSGM DSKFENNPYN GFIYTSFQER ATFISHGNTA KLATTYGDTT LAKICGTIAA DEKRHETAYT RIVEKLFEID PDGTVQALAS
301: MMRKRITMPA HLMHDGRDDD LFDHYAAVAQ RIGVYTATDY AGILEFLLRR WEVEKLGMGL SGEGRRAQDY LCTLPQRIRR LEERANDRVK LASKSKPSVS
401: FSWIYGREVE L

Arabidopsis Description

Plant stearoyl-acyl-carrier desaturase family protein [Source:UniProtKB/TrEMBL;Acc:A0A178V7P2]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.