Factsheet for TraesCS2B01G090400.1

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

mitochondrion 6
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	mitochondrion
Any Predictor:	mitochondrion, plastid
iPSORT:	mitochondrion
MultiLoc:	mitochondrion
Predotar:	mitochondrion
PProwler:	mitochondrion
TargetP:	mitochondrion
WoLF PSORT:	mitochondrion
YLoc:	plastid

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS2D01G074100.1	Wheat	mitochondrion	96.44	95.18
TraesCS2A01G075400.1	Wheat	mitochondrion	93.78	92.54
HORVU2Hr1G012780.1	Barley	mitochondrion	78.67	88.06
HORVU2Hr1G012600.2	Barley	mitochondrion	78.0	86.88
TraesCS2B01G090700.1	Wheat	plastid	75.33	85.39
TraesCS7B01G102300.1	Wheat	plastid	60.0	66.34
GSMUA_Achr6P01210_001	Banana	cytosol, endoplasmic reticulum, extracellular, golgi, peroxisome, plasma membrane, plastid, vacuole	38.0	58.56
TraesCS3B01G463000.1	Wheat	plastid	45.78	52.42
TraesCS2B01G298000.1	Wheat	plastid	45.11	51.79
TraesCS5B01G123200.1	Wheat	plastid	43.56	50.91
AT5G16230.1	Thale cress	plastid	45.11	50.62
GSMUA_Achr5P25190_001	Banana	mitochondrion	7.33	50.0
CDY26509	Canola	plastid	44.44	49.63
CDX69460	Canola	plastid	44.44	49.63
Bra008632.1-P	Field mustard	plastid	44.44	49.63
AT3G02610.2	Thale cress	plastid	45.33	49.39
Bra039178.1-P	Field mustard	plastid	43.33	49.37
AT3G02620.2	Thale cress	plastid	44.0	48.77
TraesCS5B01G539600.1	Wheat	plastid	42.22	48.59
TraesCS5B01G235800.1	Wheat	plastid	43.11	48.26
TraesCS3B01G453200.2	Wheat	mitochondrion, plastid	44.89	48.21
TraesCS5B01G235900.1	Wheat	plastid	43.56	48.16
CDY57537	Canola	plastid	43.56	47.92
CDY43232	Canola	plastid	43.33	47.68
PGSC0003DMT400041719	Potato	cytosol, peroxisome, plastid	13.11	40.41

Protein Annotations

Gene3D:1.10.620.20	MapMan:5.1.7.1	InterPro:Fatty_acid_desaturase-2	InterPro:Ferritin-like_SF	GO:GO:0003674	GO:GO:0003824
GO:GO:0006629	GO:GO:0006631	GO:GO:0008150	GO:GO:0008152	GO:GO:0009987	GO:GO:0016491
GO:GO:0045300	GO:GO:0055114	InterPro:IPR012348	PFAM:PF03405	PIRSF:PIRSF000346	PANTHER:PTHR31155
PANTHER:PTHR31155:SF10	InterPro:RNR-like	SUPFAM:SSF47240	EnsemblPlantsGene:TraesCS2B01G090400	EnsemblPlants:TraesCS2B01G090400.1	TIGR:cd01050
SEG:seg	:	:	:	:	:

Description

No Description!

Coordinates

chr2B:-:51705476..51706907

Molecular Weight (calculated)

49936.4 Da

IEP (calculated)

6.984

GRAVY (calculated)

-0.322

Length

450 amino acids

Sequence
(BLAST)

001: MATSWLLRHP CPLARPWTRT RNDIGLQVTG ITYCYWRCSR ASAGGRIMAD MSMNTTNCTA EPALLPQADA ADPPPRVSKR SPRTGRGAAV AARHEEEGTD
101: DEWLMYLEPA KLEVFDHLEP WAEANVVPLL KPAEVAWQPT DLLPDLASLG ADGFHAACFD ISARAAGLPD AHLVCLVGNM VTEEALPTYQ SIPNRFEAVR
201: DLTGSSGTAW ARWIRGWSAE ENRHGDVLNK YLFLSGRVDM RQVERTIHNL IQSGMVMNAA RSPYHGFIYV AFQERATSIS HGNTARRAKE YGDVALARIC
301: GAIAADEKRH ELAYTRIVGK LFEIDPDGAV RALAYMMRRR IVMPASLMTD GRDGDLFAHY AAVAQQAGIY TASDYRSILE HLIKQWGVEE LAAAELSDDG
401: RRARDYVCAL PQKIRRLEEK AHERSGQKAQ PATSAPFSWI FDKPVNNTMG

Best Arabidopsis Sequence Match ( AT3G02610.1 )
(BLAST)

001: MALLLNSTIT VAMKQNPLVA VSFPRTTCLG SSFSPPRLLR VSCVATNPSK TSEETDKKKF RPIKEVPNQV THTITQEKLE IFKSMENWAQ ENLLSYLKPV
101: EASWQPQDFL PETNDEDRFY EQVKELRDRT KEIPDDYFVV LVGDMITEEA LPTYQTTLNT LDGVKDETGG SLTPWAVWVR AWTAEENRHG DLLNKYLYLS
201: GRVDMRHVEK TIQYLIGSGM DSKFENNPYN GFIYTSFQER ATFISHGNTA KLATTYGDTT LAKICGTIAA DEKRHETAYT RIVEKLFEID PDGTVQALAS
301: MMRKRITMPA HLMHDGRDDD LFDHYAAVAQ RIGVYTATDY AGILEFLLRR WEVEKLGMGL SGEGRRAQDY LCTLPQRIRR LEERANDRVK LASKSKPSVS
401: FSWIYGREVE L

Arabidopsis Description

Plant stearoyl-acyl-carrier desaturase family protein [Source:UniProtKB/TrEMBL;Acc:A0A178V7P2]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.