CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 9

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	plastid
BaCelLo:	plastid
ChloroP:	plastid
iPSORT:	plastid
MultiLoc:	plastid
Predotar:	plastid
PProwler:	plastid
TargetP:	plastid
WoLF PSORT:	plastid
YLoc:	plastid

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra039178.1-P	Field mustard	plastid	94.38	97.72
CDY57537	Canola	plastid	97.31	97.31
AT3G02610.2	Thale cress	plastid	88.75	87.89
AT3G02620.2	Thale cress	plastid	84.6	85.22
CDX69460	Canola	plastid	78.97	80.15
CDY26509	Canola	plastid	78.97	80.15
CDX83464	Canola	plastid	63.81	65.58
CDY17916	Canola	plastid	63.81	65.41
CDX79807	Canola	plastid	63.81	65.09
CDY34739	Canola	plastid	43.28	65.07
CDY44250	Canola	plastid	63.33	64.91
CDX92006	Canola	plastid	62.35	64.39
CDX74242	Canola	plastid	62.1	64.14
CDX69459	Canola	plastid	62.1	63.98
CDY26510	Canola	plastid	61.86	63.73
GSMUA_Achr6P01210_001	Banana	cytosol, endoplasmic reticulum, extracellular, golgi, peroxisome, plasma membrane, plastid, vacuole	45.23	63.36
GSMUA_Achr5P25190_001	Banana	mitochondrion	9.78	60.61
HORVU7Hr1G040140.1	Barley	cytosol, nucleus, peroxisome	44.5	56.7
Zm00001d030165_P001	Maize	cytosol	45.72	55.65
PGSC0003DMT400041719	Potato	cytosol, peroxisome, plastid	18.58	52.05
TraesCS2D01G074000.1	Wheat	plastid	49.88	50.37
TraesCS2A01G075300.1	Wheat	mitochondrion	49.63	49.75
KXG38794	Sorghum	plastid	46.7	48.11
HORVU2Hr1G012600.2	Barley	mitochondrion	47.19	47.77
HORVU2Hr1G012780.1	Barley	mitochondrion	46.94	47.76
TraesCS7A01G196500.1	Wheat	plastid	46.94	47.29
Os08t0200100-01	Rice	plastid	46.45	47.03
TraesCS7B01G102300.1	Wheat	plastid	46.7	46.93
TraesCS5B01G235800.1	Wheat	plastid	45.97	46.77
TraesCS5A01G236800.1	Wheat	plastid	45.72	46.29
Zm00001d014498_P001	Maize	plastid	45.97	46.08
Zm00001d024273_P001	Maize	plastid	47.68	45.99
TraesCS5A01G237000.1	Wheat	plastid	45.23	45.79
TraesCS5B01G235900.1	Wheat	plastid	45.48	45.7
TraesCS5A01G237800.1	Wheat	plastid	45.23	45.45
KXG35977	Sorghum	plastid	45.97	45.41
EER88838	Sorghum	plastid	45.48	45.37
Zm00001d021059_P001	Maize	plastid	45.23	45.23
HORVU2Hr1G006990.1	Barley	plastid	45.23	45.23
TraesCS5D01G244700.1	Wheat	plastid	44.99	45.21
TraesCS3D01G413500.1	Wheat	plastid	45.97	44.98
TraesCS3B01G453200.2	Wheat	mitochondrion, plastid	45.72	44.63
Os03t0423300-01	Rice	plastid	45.48	44.5
KXG24679	Sorghum	plastid	45.97	44.44
TraesCS3A01G418000.1	Wheat	plastid	45.23	44.15
TraesCS2A01G075500.1	Wheat	plastid	47.92	44.04
HORVU5Hr1G068310.1	Barley	plastid	45.72	43.69
TraesCS2B01G090400.1	Wheat	mitochondrion	47.68	43.33
HORVU3Hr1G061520.7	Barley	cytosol, peroxisome	45.97	43.12
HORVU3Hr1G092740.3	Barley	cytosol, peroxisome	45.97	42.73
TraesCS2D01G074200.1	Wheat	mitochondrion, plastid	46.7	42.54
Os08t0199400-01	Rice	plastid	43.28	42.24
EER91728	Sorghum	mitochondrion, plastid	44.25	42.19
TraesCS2D01G074100.1	Wheat	mitochondrion	46.94	42.11
TraesCS2A01G075400.1	Wheat	mitochondrion	46.7	41.89
TraesCS2B01G090700.1	Wheat	plastid	40.34	41.56
OQU92381	Sorghum	plastid	45.48	41.43
Zm00001d030328_P001	Maize	mitochondrion	43.77	41.24
Os03t0741000-00	Rice	plastid	24.45	33.33
Os06t0503800-00	Rice	plastid	19.8	33.2

Protein Annotations

Gene3D:1.10.620.20	MapMan:5.1.7.1	GO:A0A078HZD0	UniProt:A0A078HZD0	EnsemblPlants:CDY43232	ProteinID:CDY43232
ProteinID:CDY43232.1	ncoils:Coil	InterPro:Fatty_acid_desaturase-2	InterPro:Ferritin-like_SF	GO:GO:0003674	GO:GO:0003824
GO:GO:0005488	GO:GO:0006629	GO:GO:0006631	GO:GO:0008150	GO:GO:0008152	GO:GO:0009987
GO:GO:0016491	GO:GO:0045300	GO:GO:0046872	GO:GO:0055114	EnsemblPlantsGene:GSBRNA2T00076259001	InterPro:IPR012348
PFAM:PF03405	PIRSF:PIRSF000346	PANTHER:PTHR31155	PANTHER:PTHR31155:SF6	InterPro:RNR-like	SUPFAM:SSF47240
UniPathway:UPA00199	UniParc:UPI0004EDD470	SEG:seg	:	:	:

Description

BnaC05g48250DBnaC05g48250D protein [Source:UniProtKB/TrEMBL;Acc:A0A078HZD0]

Coordinates

chrLK032550:+:14834..17188

Molecular Weight (calculated)

46751.6 Da

IEP (calculated)

7.020

GRAVY (calculated)

-0.484

Length

409 amino acids

Sequence
(BLAST)

001: MTTTLALNST MTTPMKHNPV VTVSSSPSLS LGQSFPRRLR VSCVATNPRK TSEQTQKKTF RPIKEVPNQI THTITQEKLE IFKSMENWAQ ENLLSYLKPV
101: ETSWQPQDLL PQTNDEDRFY VQVKELRDRT REIPDDYFVV LVGDMITEEA LPTYQTTLNT LDGVKDETGG SLTPWAVWVR AWTAEENRHG DLLNKYLYLS
201: GRVDMQHVER TIQYLIGSGM DSKFENNPYN GFIYTSFQER ATFISHANTA KLATTYGDTT LAKICGTIAA DEKRHETAYT RIVEKLFEID PDGTVQALAS
301: MMRKRITMPA HLMHDGRDDN LFDHYGAVAQ RIGVYTAMDY AGILEFLLRR WKVESLGVGL TGEGRRAQEY LCSLPQRITR LEERANDRVK LGWRPSVAFS
401: WIYGREVGL

Best Arabidopsis Sequence Match ( AT3G02610.2 )
(BLAST)

001: MKMALLLNST ITVAMKQNPL VAVSFPRTTC LGSSFSPPRL LRVSCVATNP SKTSEETDKK KFRPIKEVPN QVTHTITQEK LEIFKSMENW AQENLLSYLK
101: PVEASWQPQD FLPETNDEDR FYEQVKELRD RTKEIPDDYF VVLVGDMITE EALPTYQTTL NTLDGVKDET GGSLTPWAVW VRAWTAEENR HGDLLNKYLY
201: LSGRVDMRHV EKTIQYLIGS GMDSKFENNP YNGFIYTSFQ ERATFISHGN TAKLATTYGD TTLAKICGTI AADEKRHETA YTRIVEKLFE IDPDGTVQAL
301: ASMMRKRITM PAHLMHDGRD DDLFDHYAAV AQRIGVYTAT DYAGILEFLL RRWEVEKLGM GLSGEGRRAQ DYLCTLPQRI RRLEERANDR VKLASKSKPS
401: VSFSWIYGRE VEL

Arabidopsis Description

Plant stearoyl-acyl-carrier desaturase family protein [Source:UniProtKB/TrEMBL;Acc:A0A178V7P2]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.