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Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: plastid

Predictor Summary:
  • plastid 9
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
CDX69459 Canola plastid 97.23 97.23
AT5G16240.1 Thale cress plastid 86.65 87.31
CDY34739 Canola plastid 58.44 85.29
CDX92006 Canola plastid 83.88 84.09
CDX74242 Canola plastid 83.63 83.84
VIT_05s0094g00550.t01 Wine grape cytosol 50.63 77.01
CDY17916 Canola plastid 73.8 73.43
CDY44250 Canola plastid 73.55 73.18
CDX83464 Canola plastid 72.8 72.61
CDX79807 Canola plastid 73.3 72.57
VIT_05s0094g00730.t01 Wine grape plastid 66.0 72.38
VIT_05s0094g00580.t01 Wine grape plastid 64.48 70.72
VIT_05s0094g00740.t01 Wine grape plastid 58.44 64.99
CDX69460 Canola plastid 65.49 64.52
CDY26509 Canola plastid 64.99 64.02
CDY57537 Canola plastid 64.23 62.35
CDY43232 Canola plastid 63.73 61.86
VIT_05s0094g00650.t01 Wine grape plastid 58.44 57.57
GSMUA_Achr5P25180_001 Banana cytosol 20.91 50.3
VIT_05s0094g00630.t01 Wine grape plastid 20.65 48.81
Protein Annotations
Gene3D:1.10.620.20MapMan:5.1.7.1GO:A0A078GJ43UniProt:A0A078GJ43EnsemblPlants:CDY26510ProteinID:CDY26510
ProteinID:CDY26510.1ncoils:CoilInterPro:FADS-2_CSInterPro:Fatty_acid_desaturase-2InterPro:Ferritin-like_SFGO:GO:0003674
GO:GO:0003824GO:GO:0005488GO:GO:0005575GO:GO:0005622GO:GO:0005623GO:GO:0005737
GO:GO:0006629GO:GO:0006631GO:GO:0006633GO:GO:0008150GO:GO:0008152GO:GO:0009058
GO:GO:0009507GO:GO:0009536GO:GO:0009987GO:GO:0016491GO:GO:0045300GO:GO:0046872
GO:GO:0055114EnsemblPlantsGene:GSBRNA2T00035328001InterPro:IPR012348PFAM:PF03405PIRSF:PIRSF000346ScanProsite:PS00574
PANTHER:PTHR31155PANTHER:PTHR31155:SF6InterPro:RNR-likeSUPFAM:SSF47240UniPathway:UPA00199UniParc:UPI0004EF26BF
SEG:seg:::::
Description
BnaC09g41580DAcyl-[acyl-carrier-protein] desaturase [Source:UniProtKB/TrEMBL;Acc:A0A078GJ43]
Coordinates
chrLK032190:+:567655..570656
Molecular Weight (calculated)
45392.1 Da
IEP (calculated)
7.020
GRAVY (calculated)
-0.511
Length
397 amino acids
Sequence
(BLAST)
001: MAMAMNRIAF ISSPSVYQRS SHHHGYRSSR VFMSSTIRPA SAEVTNGRKP YLPPREVQLQ VKYSMPPQKL EIFKSLEGWA NDNLLPYLKP VEKSWQPTDF
101: LPEPESEGFY DQVKELRERC KELSDDYFVV LIGDMITEEA LPTYQTMINT LDGVRDETGA SPTPWAAWTR AWTAEENRHG DLLNKYLYLS GRVDMRQIEK
201: TIQYLIGSGM DPKTENNPYL GFIYTSFQER ATFISHGNTA GLAKKLGDSK LAQICGTIAA DEKRHETAYT KIVEKLFEID PDTTVVGFAD MMKKKIAMPA
301: HLMYDGRDDN LFEHFSSVAQ RLGVYTARDY ADILEFLVSR WNVENLVGLS GDGHKAQDYL CKLPARIRKL EERAQGRNKE AARNIPFSWI FGREIRA
Best Arabidopsis Sequence Match ( AT3G02630.1 )
(BLAST)
001: MAMAMDRIVF SPSSYVYRPC QARGSRSSRV SMASTIRSAT TEVTNGRKLY IPPREVHVQV KHSMPPQKLE IFKSLEGWAD ETLLTYLKPV EKSWQPTDFL
101: PEPESEGFYD QVKELRERCK ELPDDYFVVL VGDMITEEAL PTYQTMLNTL DGVRDETGAS PTPWAIWTRA WTAEENRHGD LLNKYLYLSG RVDMRQIEKT
201: IQYLIGSGMD PKTENNPYLG FIYTSFQERA TFISHGNTAR LAKDRGDLKL AQICGTIAAD ERRHETAYTK IVEKLFEIDP DGTILGLADM MKKKISMPAH
301: LMYDGQDDNL FEHFSTVAQR LGVYTAKDYA DILEFLVERW NVETLTDLSS EGHRAQDFVC GLPARIRKIE ERAQGRAKEA AKNIPFSWIF GRNIRA
Arabidopsis Description
S-ACP-DES5Stearoyl-[acyl-carrier-protein] 9-desaturase 5, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q9M879]
SUBAcon: [plastid]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.