Factsheet for VIT_05s0094g00630.t01

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

nucleus 2
plastid 8
mitochondrion 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
VIT_10s0003g04810.t01	Wine grape	cytosol	33.93	47.5
GSMUA_Achr5P25180_001	Banana	cytosol	33.33	33.94
VIT_05s0094g00580.t01	Wine grape	plastid	63.1	29.28
VIT_05s0094g00750.t01	Wine grape	plastid	55.36	28.79
VIT_05s0094g00730.t01	Wine grape	plastid	60.12	27.9
VIT_07s0005g03820.t01	Wine grape	nucleus, peroxisome, plastid	41.67	26.22
CDY34739	Canola	plastid	42.26	26.1
VIT_00s0499g00030.t01	Wine grape	plastid	56.55	24.17
AT3G02630.1	Thale cress	plastid	49.4	20.96
CDX92006	Canola	plastid	48.81	20.71
CDX74242	Canola	plastid	48.81	20.71
Bra001057.1-P	Field mustard	plastid	48.81	20.71
CDY26510	Canola	plastid	48.81	20.65
CDX69459	Canola	plastid	48.81	20.65
Bra008631.1-P	Field mustard	plastid	48.81	20.65
VIT_02s0012g02500.t01	Wine grape	cytosol	8.33	20.59
Bra021427.1-P	Field mustard	plastid	48.21	20.51
AT5G16240.1	Thale cress	plastid	46.43	19.8
VIT_18s0001g15460.t01	Wine grape	plastid	45.83	19.79
VIT_05s0094g00740.t01	Wine grape	plastid	38.1	17.93
VIT_05s0094g00650.t01	Wine grape	plastid	42.86	17.87
VIT_12s0034g00190.t01	Wine grape	extracellular	16.07	16.17
VIT_05s0094g00550.t01	Wine grape	cytosol	14.88	9.58
VIT_12s0034g00180.t01	Wine grape	cytosol	1.79	2.83
VIT_00s0327g00070.t01	Wine grape	cytosol, peroxisome, plastid	0.0	0.0

Protein Annotations

Gene3D:1.10.620.20	MapMan:5.1.7.1	ProteinID:CBI24685	ProteinID:CBI24685.3	UniProt:D7T2F4	EMBL:FN595507
InterPro:Fatty_acid_desaturase-2	InterPro:Ferritin-like_SF	GO:GO:0003674	GO:GO:0003824	GO:GO:0006629	GO:GO:0006631
GO:GO:0008150	GO:GO:0008152	GO:GO:0009987	GO:GO:0016491	GO:GO:0045300	GO:GO:0055114
InterPro:IPR012348	PFAM:PF03405	PANTHER:PTHR31155	PANTHER:PTHR31155:SF6	InterPro:RNR-like	SUPFAM:SSF47240
UniParc:UPI0001BE26EA	ArrayExpress:VIT_05s0094g00630	EnsemblPlantsGene:VIT_05s0094g00630	EnsemblPlants:VIT_05s0094g00630.t01	:	:

Description

No Description!

Coordinates

chr5:+:23990734..23991618

Molecular Weight (calculated)

19480.2 Da

IEP (calculated)

7.348

GRAVY (calculated)

-0.552

Length

168 amino acids

Sequence
(BLAST)

001: MGYHSSPKFS MASMHRSVSR EIKNTKKTSS SPLKVQVTHS MPPHKIEIFK SMENWVEENV LIHLKPVEKC WQPQDFLPDP ASDGFHERVK ELQERAKGTP
101: DDYFVVLVGH MITEEALPTY QTFSNFDNKF ILTNGHMQLF IPNQTEHFIS FPQFIPQRGW LSPFSQSS

Best Arabidopsis Sequence Match ( AT2G43710.1 )
(BLAST)

001: MALKFNPLVA SQPYKFPSST RPPTPSFRSP KFLCLASSSP ALSSGPKEVE SLKKPFTPPR EVHVQVLHSM PPQKIEIFKS MENWAEENLL IHLKDVEKSW
101: QPQDFLPDPA SDGFEDQVRE LRERARELPD DYFVVLVGDM ITEEALPTYQ TMLNTLDGVR DETGASPTSW AIWTRAWTAE ENRHGDLLNK YLYLSGRVDM
201: RQIEKTIQYL IGSGMDPRTE NNPYLGFIYT SFQERATFIS HGNTARQAKE HGDIKLAQIC GTIAADEKRH ETAYTKIVEK LFEIDPDGTV MAFADMMRKK
301: ISMPAHLMYD GRNDNLFDNF SSVAQRLGVY TAKDYADILE FLVGRWKIQD LTGLSGEGNK AQDYLCGLAP RIKRLDERAQ ARAKKGPKIP FSWIHDREVQ
401: L

Arabidopsis Description

FAB2Stearoyl-[acyl-carrier-protein] 9-desaturase 7, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:O22832]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.