Factsheet for Bra008631.1-P

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 10
mitochondrion 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX69459	Canola	plastid	99.75	99.75
AT5G16240.1	Thale cress	plastid	86.4	87.06
Bra021427.1-P	Field mustard	plastid	83.38	83.8
Bra001057.1-P	Field mustard	plastid	83.38	83.59
VIT_05s0094g00550.t01	Wine grape	cytosol	50.88	77.39
VIT_05s0094g00730.t01	Wine grape	plastid	66.25	72.65
Bra000321.1-P	Field mustard	plastid	72.54	72.36
Bra004778.1-P	Field mustard	plastid	73.05	72.32
VIT_05s0094g00580.t01	Wine grape	plastid	64.74	70.99
VIT_05s0094g00740.t01	Wine grape	plastid	58.69	65.27
Bra008632.1-P	Field mustard	plastid	65.49	64.52
Bra039178.1-P	Field mustard	plastid	63.98	64.3
VIT_05s0094g00650.t01	Wine grape	plastid	58.69	57.82
GSMUA_Achr5P25180_001	Banana	cytosol	20.91	50.3
VIT_05s0094g00630.t01	Wine grape	plastid	20.65	48.81

Protein Annotations

Gene3D:1.10.620.20	MapMan:5.1.7.1	EnsemblPlantsGene:Bra008631	EnsemblPlants:Bra008631.1	EnsemblPlants:Bra008631.1-P	ncoils:Coil
InterPro:FADS-2_CS	InterPro:Fatty_acid_desaturase-2	InterPro:Ferritin-like_SF	GO:GO:0003674	GO:GO:0003824	GO:GO:0005488
GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0006629	GO:GO:0006631
GO:GO:0006633	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009507	GO:GO:0009536
GO:GO:0009987	GO:GO:0016491	GO:GO:0045300	GO:GO:0046872	GO:GO:0055114	InterPro:IPR012348
UniProt:M4CWN4	PFAM:PF03405	PIRSF:PIRSF000346	ScanProsite:PS00574	PANTHER:PTHR31155	PANTHER:PTHR31155:SF11
InterPro:RNR-like	SUPFAM:SSF47240	UniParc:UPI0002544A5D	:	:	:

Description

AT3G02630 (E=8e-199) | acyl-(acyl-carrier-protein) desaturase, putative / stearoyl-ACP desaturase, putative

Coordinates

chrA10:-:13161978..13164575

Molecular Weight (calculated)

45549.2 Da

IEP (calculated)

6.525

GRAVY (calculated)

-0.521

Length

397 amino acids

Sequence
(BLAST)

001: MVMAMDRIAF TSSPSAYQRS YHPHGYRSSR VFMSSTIRPA STEVTNGRKP YLPPREVQLQ VKYSMPPQKL EIFKSLEEWA NDNLLPYLKP VEKSWQPTDF
101: LPEPESEGFY DQVKELRERC KELSDDYFVV LIGDMITEEA LPTYQTMINT LDGVRDETGA SPTPWAVWTR AWTAEENRHG DLLNKYLYLS GRVDMRQIEK
201: TIQYLIGSGM DPKTENNPYL GFIYTSFQER ATFISHGNTA GLAKKLGDSK LAQICGTIAA DEKRHETAYT KIVEKLFEID PDTTVVGFAD MMKKKIAMPA
301: HLMYDGCDDN LFEHFSSVAQ RLGVYTARDY ADILEFLVRR WNVENLVGLS GDGHKAQDYL CKLPARIRKL EERAQGRNKD AARNIPFSWI FGREIRA

Best Arabidopsis Sequence Match ( AT3G02630.1 )
(BLAST)

001: MAMAMDRIVF SPSSYVYRPC QARGSRSSRV SMASTIRSAT TEVTNGRKLY IPPREVHVQV KHSMPPQKLE IFKSLEGWAD ETLLTYLKPV EKSWQPTDFL
101: PEPESEGFYD QVKELRERCK ELPDDYFVVL VGDMITEEAL PTYQTMLNTL DGVRDETGAS PTPWAIWTRA WTAEENRHGD LLNKYLYLSG RVDMRQIEKT
201: IQYLIGSGMD PKTENNPYLG FIYTSFQERA TFISHGNTAR LAKDRGDLKL AQICGTIAAD ERRHETAYTK IVEKLFEIDP DGTILGLADM MKKKISMPAH
301: LMYDGQDDNL FEHFSTVAQR LGVYTAKDYA DILEFLVERW NVETLTDLSS EGHRAQDFVC GLPARIRKIE ERAQGRAKEA AKNIPFSWIF GRNIRA

Arabidopsis Description

S-ACP-DES5Stearoyl-[acyl-carrier-protein] 9-desaturase 5, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q9M879]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.