Factsheet for Bra004778.1-P

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 10
vacuole 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX79807	Canola	plastid	98.75	98.75
Bra000321.1-P	Field mustard	plastid	95.01	95.73
AT2G43710.1	Thale cress	plastid	92.77	92.77
GSMUA_Achr8P00820_001	Banana	cytosol, nucleus, peroxisome	36.16	88.41
PGSC0003DMT400042118	Potato	plastid	83.29	84.13
Solyc06g053480.2.1	Tomato	plastid	83.29	84.13
GSMUA_Achr6P27590_001	Banana	nucleus, peroxisome, plastid	32.92	83.54
KRH71270	Soybean	endoplasmic reticulum, nucleus	80.8	82.86
VIT_05s0094g00750.t01	Wine grape	plastid	65.34	81.11
KRH50195	Soybean	plastid	80.3	80.1
Zm00001d012033_P002	Maize	mitochondrion	77.81	79.59
EES04113	Sorghum	plastid	77.56	78.34
Os01t0919900-01	Rice	plastid	78.05	78.25
TraesCS3B01G463000.1	Wheat	plastid	76.31	77.86
TraesCS3D01G421700.1	Wheat	plastid	76.06	77.81
GSMUA_Achr7P22860_001	Banana	plastid	69.08	76.73
GSMUA_Achr8P08750_001	Banana	plastid	67.33	76.49
VIT_12s0034g00180.t01	Wine grape	cytosol	20.2	76.42
Os04t0379900-01	Rice	plastid	74.06	76.15
Zm00001d042344_P002	Maize	plastid	78.05	75.97
EES10606	Sorghum	plastid	73.82	75.51
TraesCS2A01G280700.2	Wheat	plastid	73.82	75.51
TraesCS2D01G279500.2	Wheat	golgi, plastid	73.57	75.26
TraesCS2B01G298000.1	Wheat	plastid	73.57	75.26
Zm00001d025170_P001	Maize	plastid	73.07	74.74
Zm00001d004019_P001	Maize	plastid	72.57	74.23
Bra021427.1-P	Field mustard	plastid	72.57	73.67
Bra001057.1-P	Field mustard	plastid	72.57	73.48
Bra008631.1-P	Field mustard	plastid	72.32	73.05
VIT_12s0034g00190.t01	Wine grape	extracellular	28.68	68.86
TraesCS5D01G131500.1	Wheat	plastid	65.59	68.85
TraesCS5A01G123600.2	Wheat	plastid	66.08	68.83
HORVU5Hr1G039730.1	Barley	plastid	65.84	68.57
TraesCS5B01G123200.1	Wheat	plastid	65.59	68.31
HORVU2Hr1G068670.2	Barley	mitochondrion, plastid	73.82	66.52
Bra039178.1-P	Field mustard	plastid	65.09	66.08
HORVU3Hr1G094050.3	Barley	plastid	76.56	66.02
TraesCS5D01G548700.1	Wheat	plastid	64.09	65.73
TraesCS5B01G539600.1	Wheat	plastid	63.34	64.96
Bra008632.1-P	Field mustard	plastid	65.09	64.76
GSMUA_Achr5P25160_001	Banana	plastid	63.59	64.72
KXG30261	Sorghum	plastid	67.08	64.66
HORVU5Hr1G123110.1	Barley	mitochondrion, plastid	63.34	63.66
TraesCS4A01G326700.1	Wheat	plastid	64.59	63.33
TraesCS3A01G426800.3	Wheat	plastid	74.81	62.24
Zm00001d050552_P001	Maize	plastid	67.08	61.14
Os02t0504800-01	Rice	plastid	48.38	60.25

Protein Annotations

Gene3D:1.10.620.20	MapMan:5.1.7.1	EnsemblPlantsGene:Bra004778	EnsemblPlants:Bra004778.1	EnsemblPlants:Bra004778.1-P	InterPro:FADS-2_CS
InterPro:Fatty_acid_desaturase-2	InterPro:Ferritin-like_SF	GO:GO:0003674	GO:GO:0003824	GO:GO:0005488	GO:GO:0005575
GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0006629	GO:GO:0006631	GO:GO:0006633
GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009507	GO:GO:0009536	GO:GO:0009987
GO:GO:0016491	GO:GO:0045300	GO:GO:0046872	GO:GO:0055114	InterPro:IPR012348	UniProt:M4CKP3
PFAM:PF03405	PIRSF:PIRSF000346	ScanProsite:PS00574	PANTHER:PTHR31155	PANTHER:PTHR31155:SF11	InterPro:RNR-like
SUPFAM:SSF47240	UniParc:UPI0002547B73	SEG:seg	:	:	:

Description

AT2G43710 (E=9e-214) SSI2, FAB2 | SSI2; acyl-[acyl-carrier-protein] desaturase/ stearoyl-CoA 9-desaturase

Coordinates

chrA05:+:1802120..1804421

Molecular Weight (calculated)

45578.3 Da

IEP (calculated)

6.595

GRAVY (calculated)

-0.530

Length

401 amino acids

Sequence
(BLAST)

001: MALKLNPLAS QPYKLHTSAR PPISTFRSPK FLCLASSSSP ALSSSTKEVE SLKKPFTPPK EVHVQVLHSM PPQKIEIFKS MEDWAEHNLL PHLKDVEKSW
101: QPQDFLPDPA SDGFEDQVKE LRERARELPD DYFVVLVGDM ITEEALPTYQ TMLNTLDGVR DETGASPTSW AVWTRAWTAE ENRHGDLLNK YLYLSGRVDM
201: RQIEKTIQYL IGSGMDPRTE NNPYLGFIYT SFQERATFVS HGNTARQAKE HGDLKLAQIC GTIAADEKRH ETAYTKIVEK LLEIDPDGTV VAFADMMRKK
301: ISMPAHLMYD GRDDKLFDNF SSVAQRLGVY TAKDYADILE FLVGRWKIES LSGLSGEGNK AQEYLCGLTP RIRRLDERAQ ARAKKGPKIP FSWIHDREVQ
401: L

Best Arabidopsis Sequence Match ( AT2G43710.1 )
(BLAST)

001: MALKFNPLVA SQPYKFPSST RPPTPSFRSP KFLCLASSSP ALSSGPKEVE SLKKPFTPPR EVHVQVLHSM PPQKIEIFKS MENWAEENLL IHLKDVEKSW
101: QPQDFLPDPA SDGFEDQVRE LRERARELPD DYFVVLVGDM ITEEALPTYQ TMLNTLDGVR DETGASPTSW AIWTRAWTAE ENRHGDLLNK YLYLSGRVDM
201: RQIEKTIQYL IGSGMDPRTE NNPYLGFIYT SFQERATFIS HGNTARQAKE HGDIKLAQIC GTIAADEKRH ETAYTKIVEK LFEIDPDGTV MAFADMMRKK
301: ISMPAHLMYD GRNDNLFDNF SSVAQRLGVY TAKDYADILE FLVGRWKIQD LTGLSGEGNK AQDYLCGLAP RIKRLDERAQ ARAKKGPKIP FSWIHDREVQ
401: L

Arabidopsis Description

FAB2Stearoyl-[acyl-carrier-protein] 9-desaturase 7, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:O22832]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.