CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 8
extracellular 1
endoplasmic reticulum 1
vacuole 1
plasma membrane 1
golgi 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	plastid, secretory
BaCelLo:	plastid
ChloroP:	plastid
iPSORT:	secretory
MultiLoc:	plastid
Predotar:	plastid
PProwler:	plastid
TargetP:	plastid
WoLF PSORT:	plastid
YLoc:	plastid

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d050552_P001	Maize	plastid	88.22	83.41
GSMUA_Achr8P00820_001	Banana	cytosol, nucleus, peroxisome	29.57	75.0
GSMUA_Achr6P27590_001	Banana	nucleus, peroxisome, plastid	27.88	73.42
EES10606	Sorghum	plastid	68.51	72.7
TraesCS5D01G131500.1	Wheat	plastid	65.62	71.47
TraesCS5B01G123200.1	Wheat	plastid	66.11	71.43
HORVU5Hr1G039730.1	Barley	plastid	66.11	71.43
TraesCS5A01G123600.2	Wheat	plastid	65.87	71.17
TraesCS5D01G548700.1	Wheat	plastid	66.59	70.84
TraesCS5B01G539600.1	Wheat	plastid	66.11	70.33
PGSC0003DMT400002555	Potato	plastid	65.87	69.72
Os02t0504800-01	Rice	plastid	53.61	69.25
Solyc03g063110.2.1	Tomato	plastid	65.38	69.21
VIT_12s0034g00180.t01	Wine grape	cytosol	17.55	68.87
EES04113	Sorghum	plastid	65.62	68.77
PGSC0003DMT400042118	Potato	plastid	65.62	68.77
Solyc06g053480.2.1	Tomato	plastid	65.62	68.77
TraesCS4A01G326700.1	Wheat	plastid	67.55	68.7
VIT_00s0499g00030.t01	Wine grape	plastid	64.9	68.7
KRH71270	Soybean	endoplasmic reticulum, nucleus	64.42	68.54
Bra000321.1-P	Field mustard	plastid	65.14	68.09
CDX83464	Canola	plastid	65.14	68.09
HORVU5Hr1G123110.1	Barley	mitochondrion, plastid	65.14	67.92
KRH50195	Soybean	plastid	65.62	67.91
AT2G43710.1	Thale cress	plastid	65.38	67.83
CDY17916	Canola	plastid	64.9	67.67
CDY44250	Canola	plastid	64.9	67.67
VIT_05s0094g00750.t01	Wine grape	plastid	52.4	67.49
CDX79807	Canola	plastid	64.9	67.33
Bra004778.1-P	Field mustard	plastid	64.66	67.08
PGSC0003DMT400041874	Potato	plastid	62.5	66.16
GSMUA_Achr7P22860_001	Banana	plastid	57.21	65.93
Solyc11g008680.1.1	Tomato	plastid	62.26	65.9
GSMUA_Achr8P08750_001	Banana	plastid	55.77	65.72
EES01858	Sorghum	mitochondrion, plastid	56.49	61.84
GSMUA_Achr5P25160_001	Banana	plastid	56.97	60.15
VIT_12s0034g00190.t01	Wine grape	extracellular	22.36	55.69
KXG38794	Sorghum	plastid	46.63	48.87
OQU92381	Sorghum	plastid	49.76	46.1
KXG24679	Sorghum	plastid	45.19	44.44
EER88838	Sorghum	plastid	43.27	43.9
EER91728	Sorghum	mitochondrion, plastid	44.71	43.36
KXG35977	Sorghum	plastid	43.03	43.24
OQU85014	Sorghum	plastid, vacuole	24.52	27.06

Protein Annotations

Gene3D:1.10.620.20	MapMan:5.1.7.1	UniProt:A0A194YPZ1	InterPro:FADS-2_CS	InterPro:Fatty_acid_desaturase-2	InterPro:Ferritin-like_SF
GO:GO:0003674	GO:GO:0003824	GO:GO:0005488	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623
GO:GO:0005737	GO:GO:0006629	GO:GO:0006631	GO:GO:0006633	GO:GO:0008150	GO:GO:0008152
GO:GO:0009058	GO:GO:0009507	GO:GO:0009536	GO:GO:0009987	GO:GO:0016491	GO:GO:0045300
GO:GO:0046872	GO:GO:0055114	InterPro:IPR012348	EnsemblPlants:KXG30261	ProteinID:KXG30261	ProteinID:KXG30261.1
PFAM:PF03405	PIRSF:PIRSF000346	ScanProsite:PS00574	PANTHER:PTHR31155	PANTHER:PTHR31155:SF8	InterPro:RNR-like
EnsemblPlantsGene:SORBI_3004G153300	SUPFAM:SSF47240	UniParc:UPI0007F260C6	SEG:seg	:	:

Description

hypothetical protein

Coordinates

chr4:-:48427276..48428741

Molecular Weight (calculated)

46726.3 Da

IEP (calculated)

7.095

GRAVY (calculated)

-0.397

Length

416 amino acids

Sequence
(BLAST)

001: MSPMAAAAVG MSPMAAAVAA SSFPSCGPFR CPAAATRPHC SVSRRRSFSS VVAMASAAQV RAPSRKPFAP PREVHRPVAH SLPPQKREIF ESLDSWAADN
101: ILVLLKPVER SWQPQDYLPD AASESFADDV RELRERAQEI PDDYLVCFVG DMVTEEALPT YQTMLNTLDG GVRDETGASA TSWAVWTRAW AAEENRHGDL
201: MNKYLFLTGR VDMRQIEKTI QYLIASGMDP KTETNPYMGF VYTSFQERAT FISHGNTARH ARRYGDAKLA QICGTIAADE KRHESAYERI VAKLFEVDPD
301: YTVRAFADTM RKKVAMPAHL MYDGHDDALF ARFSAVAQRL GVYTARDYAD ILEFLVRRWG VQDLTGLSGE GRRAQEFVCE LGPRFRRLEE RAHDKAKDKD
401: TEFAPFSWIH GRQVQL

Best Arabidopsis Sequence Match ( AT2G43710.2 )
(BLAST)

001: MALKFNPLVA SQPYKFPSST RPPTPSFRSP KFLCLASSSP ALSSGPKSVE SLKKPFTPPR EVHVQVLHSM PPQKIEIFKS MENWAEENLL IHLKDVEKSW
101: QPQDFLPDPA SDGFEDQVRE LRERARELPD DYFVVLVGDM ITEEALPTYQ TMLNTLDGVR DETGASPTSW AIWTRAWTAE ENRHGDLLNK YLYLSGRVDM
201: RQIEKTIQYL IGSGMDPRTE NNPYLGFIYT SFQERATFIS HGNTARQAKE HGDIKLAQIC GTIAADEKRH ETAYTKIVEK LFEIDPDGTV MAFADMMRKK
301: ISMPAHLMYD GRNDNLFDNF SSVAQRLGVY TAKDYADILE FLVGRWKIQD LTGLSGEGNK AQDYLCGLAP RIKRLDERAQ ARAKKGPKIP FSWIHDREVQ
401: L

Arabidopsis Description

FAB2Stearoyl-[acyl-carrier-protein] 9-desaturase 7, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:O22832]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.