Factsheet for AT2G43710.1

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 9

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	plastid
BaCelLo:	plastid
ChloroP:	plastid
iPSORT:	plastid
MultiLoc:	plastid
Predotar:	plastid
PProwler:	plastid
TargetP:	plastid
WoLF PSORT:	plastid
YLoc:	plastid

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY44250	Canola	plastid	94.26	94.74
Bra000321.1-P	Field mustard	plastid	94.02	94.72
CDX83464	Canola	plastid	94.02	94.72
CDY17916	Canola	plastid	93.27	93.73
CDX79807	Canola	plastid	93.02	93.02
Bra004778.1-P	Field mustard	plastid	92.77	92.77
GSMUA_Achr8P00820_001	Banana	cytosol, nucleus, peroxisome	36.91	90.24
Solyc06g053480.2.1	Tomato	plastid	84.29	85.14
PGSC0003DMT400042118	Potato	plastid	84.04	84.89
VIT_05s0094g00750.t01	Wine grape	plastid	67.58	83.9
KRH71270	Soybean	endoplasmic reticulum, nucleus	81.55	83.63
GSMUA_Achr6P27590_001	Banana	nucleus, peroxisome, plastid	32.92	83.54
KRH50195	Soybean	plastid	81.3	81.09
VIT_12s0034g00180.t01	Wine grape	cytosol	20.95	79.25
Zm00001d012033_P002	Maize	mitochondrion	77.06	78.83
Os01t0919900-01	Rice	plastid	77.81	78.0
EES04113	Sorghum	plastid	76.81	77.58
Os04t0379900-01	Rice	plastid	75.06	77.18
TraesCS3B01G463000.1	Wheat	plastid	75.56	77.1
TraesCS3D01G421700.1	Wheat	plastid	75.31	77.04
GSMUA_Achr8P08750_001	Banana	plastid	67.58	76.77
GSMUA_Achr7P22860_001	Banana	plastid	69.08	76.73
TraesCS2A01G280700.2	Wheat	plastid	74.56	76.28
TraesCS2D01G279500.2	Wheat	golgi, plastid	74.31	76.02
TraesCS2B01G298000.1	Wheat	plastid	74.31	76.02
EES10606	Sorghum	plastid	74.06	75.77
Zm00001d042344_P002	Maize	plastid	77.06	75.0
Zm00001d025170_P001	Maize	plastid	73.07	74.74
Zm00001d004019_P001	Maize	plastid	72.82	74.49
AT3G02630.1	Thale cress	plastid	72.82	73.74
AT5G16240.1	Thale cress	plastid	71.32	72.59
VIT_12s0034g00190.t01	Wine grape	extracellular	29.18	70.06
TraesCS5A01G123600.2	Wheat	plastid	66.08	68.83
TraesCS5D01G131500.1	Wheat	plastid	65.34	68.59
HORVU5Hr1G039730.1	Barley	plastid	65.59	68.31
TraesCS5B01G123200.1	Wheat	plastid	65.34	68.05
HORVU2Hr1G068670.2	Barley	mitochondrion, plastid	74.56	67.19
TraesCS5D01G548700.1	Wheat	plastid	64.59	66.24
TraesCS5B01G539600.1	Wheat	plastid	64.09	65.73
GSMUA_Achr5P25160_001	Banana	plastid	64.34	65.48
KXG30261	Sorghum	plastid	67.83	65.38
HORVU3Hr1G094050.3	Barley	plastid	75.56	65.16
HORVU5Hr1G123110.1	Barley	mitochondrion, plastid	64.34	64.66
AT3G02610.2	Thale cress	plastid	66.33	64.41
AT1G43800.1	Thale cress	plastid	62.59	64.19
AT5G16230.1	Thale cress	plastid	64.09	64.09
TraesCS4A01G326700.1	Wheat	plastid	65.09	63.81
AT3G02620.2	Thale cress	plastid	64.09	63.3
TraesCS3A01G426800.3	Wheat	plastid	74.06	61.62
Zm00001d050552_P001	Maize	plastid	67.33	61.36
Os02t0504800-01	Rice	plastid	48.88	60.87

Protein Annotations

Gene3D:1.10.620.20	MapMan:5.1.7.1	EntrezGene:818973	ProteinID:AAB64035.1	ProteinID:AEC10310.1	ProteinID:AEC10311.1
EMBL:AF395441	EMBL:AK230443	ArrayExpress:AT2G43710	EnsemblPlantsGene:AT2G43710	RefSeq:AT2G43710	TAIR:AT2G43710
RefSeq:AT2G43710-TAIR-G	EnsemblPlants:AT2G43710.1	TAIR:AT2G43710.1	EMBL:AY048233	EMBL:AY094014	Unigene:At.22018
InterPro:FADS-2_CS	InterPro:Fatty_acid_desaturase-2	InterPro:Ferritin-like_SF	GO:GO:0002213	GO:GO:0003674	GO:GO:0003824
GO:GO:0004768	GO:GO:0005488	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737
GO:GO:0006629	GO:GO:0006631	GO:GO:0006633	GO:GO:0006636	GO:GO:0006950	GO:GO:0006952
GO:GO:0007154	GO:GO:0007165	GO:GO:0008150	GO:GO:0008152	GO:GO:0008610	GO:GO:0009058
GO:GO:0009507	GO:GO:0009534	GO:GO:0009536	GO:GO:0009570	GO:GO:0009579	GO:GO:0009605
GO:GO:0009607	GO:GO:0009719	GO:GO:0009987	GO:GO:0016491	GO:GO:0042742	GO:GO:0045300
GO:GO:0046872	GO:GO:0051607	GO:GO:0055114	GO:GO:0102786	GO:GO:2000022	GO:GO:2000031
InterPro:IPR012348	RefSeq:NP_181899.1	RefSeq:NP_850400.1	UniProt:O22832	PFAM:PF03405	PIRSF:PIRSF000346
PO:PO:0000013	PO:PO:0000037	PO:PO:0000230	PO:PO:0000293	PO:PO:0001054	PO:PO:0001078
PO:PO:0001081	PO:PO:0001170	PO:PO:0001185	PO:PO:0004507	PO:PO:0007064	PO:PO:0007095
PO:PO:0007098	PO:PO:0007103	PO:PO:0007115	PO:PO:0007123	PO:PO:0007131	PO:PO:0007611
PO:PO:0007616	PO:PO:0008019	PO:PO:0009005	PO:PO:0009006	PO:PO:0009009	PO:PO:0009010
PO:PO:0009025	PO:PO:0009029	PO:PO:0009030	PO:PO:0009031	PO:PO:0009032	PO:PO:0009046
PO:PO:0009047	PO:PO:0009052	PO:PO:0020030	PO:PO:0020038	PO:PO:0020100	PO:PO:0020137
PO:PO:0025022	PO:PO:0025281	ScanProsite:PS00574	PANTHER:PTHR31155	PANTHER:PTHR31155:SF11	InterPro:RNR-like
SUPFAM:SSF47240	Symbol:SSI2	UniParc:UPI0000048658	EMBL:X93461	SEG:seg	:

Description

FAB2Stearoyl-[acyl-carrier-protein] 9-desaturase 7, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:O22832]

Coordinates

chr2:+:18119873..18122889

Molecular Weight (calculated)

45695.4 Da

IEP (calculated)

6.437

GRAVY (calculated)

-0.532

Length

401 amino acids

Sequence
(BLAST)

001: MALKFNPLVA SQPYKFPSST RPPTPSFRSP KFLCLASSSP ALSSGPKEVE SLKKPFTPPR EVHVQVLHSM PPQKIEIFKS MENWAEENLL IHLKDVEKSW
101: QPQDFLPDPA SDGFEDQVRE LRERARELPD DYFVVLVGDM ITEEALPTYQ TMLNTLDGVR DETGASPTSW AIWTRAWTAE ENRHGDLLNK YLYLSGRVDM
201: RQIEKTIQYL IGSGMDPRTE NNPYLGFIYT SFQERATFIS HGNTARQAKE HGDIKLAQIC GTIAADEKRH ETAYTKIVEK LFEIDPDGTV MAFADMMRKK
301: ISMPAHLMYD GRNDNLFDNF SSVAQRLGVY TAKDYADILE FLVGRWKIQD LTGLSGEGNK AQDYLCGLAP RIKRLDERAQ ARAKKGPKIP FSWIHDREVQ
401: L

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.