Factsheet for TraesCS5B01G539600.1

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 8

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	plastid
ChloroP:	plastid
iPSORT:	plastid
MultiLoc:	plastid
Predotar:	plastid
PProwler:	plastid
TargetP:	plastid
WoLF PSORT:	plastid
YLoc:	plastid

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS5D01G548700.1	Wheat	plastid	95.65	95.65
TraesCS4A01G326700.1	Wheat	plastid	93.61	89.49
HORVU5Hr1G123110.1	Barley	mitochondrion, plastid	90.28	88.47
TraesCS5B01G123200.1	Wheat	plastid	81.84	83.12
GSMUA_Achr8P00820_001	Banana	cytosol, nucleus, peroxisome	31.71	75.61
GSMUA_Achr6P27590_001	Banana	nucleus, peroxisome, plastid	29.16	72.15
TraesCS2B01G298000.1	Wheat	plastid	71.36	71.17
TraesCS3B01G463000.1	Wheat	plastid	68.29	67.94
VIT_00s0499g00030.t01	Wine grape	plastid	67.77	67.43
PGSC0003DMT400002555	Potato	plastid	67.77	67.43
Solyc06g053480.2.1	Tomato	plastid	67.77	66.75
Solyc03g063110.2.1	Tomato	plastid	66.75	66.41
PGSC0003DMT400042118	Potato	plastid	67.26	66.25
KXG30261	Sorghum	plastid	70.33	66.11
VIT_12s0034g00180.t01	Wine grape	cytosol	17.9	66.04
GSMUA_Achr7P22860_001	Banana	plastid	60.61	65.65
VIT_05s0094g00750.t01	Wine grape	plastid	54.22	65.63
KRH71270	Soybean	endoplasmic reticulum, nucleus	65.47	65.47
Solyc11g008680.1.1	Tomato	plastid	65.47	65.14
PGSC0003DMT400041874	Potato	plastid	65.22	64.89
CDY44250	Canola	plastid	65.73	64.41
CDY17916	Canola	plastid	65.73	64.41
Bra000321.1-P	Field mustard	plastid	65.47	64.32
CDX83464	Canola	plastid	65.47	64.32
KRH50195	Soybean	plastid	65.98	64.18
AT2G43710.1	Thale cress	plastid	65.73	64.09
GSMUA_Achr8P08750_001	Banana	plastid	57.29	63.46
CDX79807	Canola	plastid	64.96	63.34
Bra004778.1-P	Field mustard	plastid	64.96	63.34
Zm00001d050552_P001	Maize	plastid	69.82	62.05
Os02t0504800-01	Rice	plastid	50.64	61.49
GSMUA_Achr5P25160_001	Banana	plastid	57.29	56.85
VIT_12s0034g00190.t01	Wine grape	extracellular	22.51	52.69
TraesCS7B01G102300.1	Wheat	plastid	48.34	46.44
TraesCS5B01G235800.1	Wheat	plastid	46.55	45.27
TraesCS3B01G453200.2	Wheat	mitochondrion, plastid	47.31	44.15
TraesCS5B01G235900.1	Wheat	plastid	45.78	43.98
TraesCS2B01G090400.1	Wheat	mitochondrion	48.59	42.22
TraesCS2B01G090700.1	Wheat	plastid	40.66	40.05

Protein Annotations

Gene3D:1.10.620.20	MapMan:5.1.7.1	InterPro:FADS-2_CS	InterPro:Fatty_acid_desaturase-2	InterPro:Ferritin-like_SF	GO:GO:0003674
GO:GO:0003824	GO:GO:0006629	GO:GO:0006631	GO:GO:0006633	GO:GO:0008150	GO:GO:0008152
GO:GO:0009058	GO:GO:0009987	GO:GO:0016491	GO:GO:0045300	GO:GO:0055114	InterPro:IPR012348
PFAM:PF03405	PIRSF:PIRSF000346	ScanProsite:PS00574	PANTHER:PTHR31155	PANTHER:PTHR31155:SF11	InterPro:RNR-like
SUPFAM:SSF47240	EnsemblPlantsGene:TraesCS5B01G539600	EnsemblPlants:TraesCS5B01G539600.1	TIGR:cd01050	:	:

Description

No Description!

Coordinates

chr5B:+:694692517..694694163

Molecular Weight (calculated)

44566.0 Da

IEP (calculated)

6.863

GRAVY (calculated)

-0.441

Length

391 amino acids

Sequence
(BLAST)

001: MYLMASLPSH GAFHTPLWYS CSRSTTMVMA TASKAKDGVP GKAFSPRKAS HRDRVAHSLP PEKREVFDSL NSWAEDNILV LLKPVERSWQ PQDYLPEPSS
101: DRFYDEVKEL RERAEEIPDD YLVCLVGDMV TEEALPTYQK MLNILDGGVR DETGSSQTSW AVWTRAWTAE ENRHGDLMNK YIYLTGRADM RQVEKTIQYL
201: VGAGMDPKTE ANPYEFFIYT SFQERATFIS HGNTARHARK YGDLKLAQIS GTIAADERRH ELAYTKIVEK LFEVDPNYTV LAFASIMKKK ITMPAHLMYD
301: GQENNLFEHF SAVAQRLGVY TAMDYADILE FLVQRWNVAG LTGLSGEGRR AQDYLCSLGP RFGKLLERAQ GSQKKLPVVP FSWIYGRQVQ L

Best Arabidopsis Sequence Match ( AT2G43710.1 )
(BLAST)

001: MALKFNPLVA SQPYKFPSST RPPTPSFRSP KFLCLASSSP ALSSGPKEVE SLKKPFTPPR EVHVQVLHSM PPQKIEIFKS MENWAEENLL IHLKDVEKSW
101: QPQDFLPDPA SDGFEDQVRE LRERARELPD DYFVVLVGDM ITEEALPTYQ TMLNTLDGVR DETGASPTSW AIWTRAWTAE ENRHGDLLNK YLYLSGRVDM
201: RQIEKTIQYL IGSGMDPRTE NNPYLGFIYT SFQERATFIS HGNTARQAKE HGDIKLAQIC GTIAADEKRH ETAYTKIVEK LFEIDPDGTV MAFADMMRKK
301: ISMPAHLMYD GRNDNLFDNF SSVAQRLGVY TAKDYADILE FLVGRWKIQD LTGLSGEGNK AQDYLCGLAP RIKRLDERAQ ARAKKGPKIP FSWIHDREVQ
401: L

Arabidopsis Description

FAB2Stearoyl-[acyl-carrier-protein] 9-desaturase 7, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:O22832]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.