Factsheet for TraesCS5B01G123200.1

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 6
cytosol 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	cytosol, plastid
ChloroP:	plastid
iPSORT:	plastid
MultiLoc:	cytosol
Predotar:	plastid
PProwler:	mitochondrion
TargetP:	plastid
WoLF PSORT:	plastid
YLoc:	plastid

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS5A01G123600.2	Wheat	plastid	97.92	97.92
TraesCS5D01G131500.1	Wheat	plastid	97.14	97.91
HORVU5Hr1G039730.1	Barley	plastid	97.66	97.66
TraesCS5B01G539600.1	Wheat	plastid	83.12	81.84
GSMUA_Achr8P00820_001	Banana	cytosol, nucleus, peroxisome	34.03	79.88
GSMUA_Achr6P27590_001	Banana	nucleus, peroxisome, plastid	31.95	77.85
TraesCS2B01G298000.1	Wheat	plastid	73.77	72.45
TraesCS3B01G463000.1	Wheat	plastid	71.17	69.72
Solyc06g053480.2.1	Tomato	plastid	71.43	69.27
VIT_00s0499g00030.t01	Wine grape	plastid	70.65	69.21
PGSC0003DMT400002555	Potato	plastid	70.13	68.7
PGSC0003DMT400042118	Potato	plastid	70.65	68.51
Solyc03g063110.2.1	Tomato	plastid	69.35	67.94
KRH71270	Soybean	endoplasmic reticulum, nucleus	68.57	67.52
Solyc11g008680.1.1	Tomato	plastid	68.31	66.92
CDY44250	Canola	plastid	69.09	66.67
Bra000321.1-P	Field mustard	plastid	68.83	66.58
VIT_05s0094g00750.t01	Wine grape	plastid	55.84	66.56
GSMUA_Achr7P22860_001	Banana	plastid	62.34	66.48
CDY17916	Canola	plastid	68.83	66.42
PGSC0003DMT400041874	Potato	plastid	67.79	66.41
CDX83464	Canola	plastid	68.57	66.33
KRH50195	Soybean	plastid	69.09	66.17
KXG30261	Sorghum	plastid	71.43	66.11
CDX79807	Canola	plastid	68.57	65.84
GSMUA_Achr8P08750_001	Banana	plastid	60.26	65.72
Bra004778.1-P	Field mustard	plastid	68.31	65.59
AT2G43710.1	Thale cress	plastid	68.05	65.34
VIT_12s0034g00180.t01	Wine grape	cytosol	17.92	65.09
Zm00001d050552_P001	Maize	plastid	71.43	62.5
Os02t0504800-01	Rice	plastid	51.69	61.8
GSMUA_Achr5P25160_001	Banana	plastid	59.74	58.38
VIT_12s0034g00190.t01	Wine grape	extracellular	21.82	50.3
TraesCS7B01G102300.1	Wheat	plastid	50.39	47.67
TraesCS3B01G453200.2	Wheat	mitochondrion, plastid	50.91	46.78
TraesCS5B01G235800.1	Wheat	plastid	48.83	46.77
TraesCS5B01G235900.1	Wheat	plastid	49.09	46.44
TraesCS2B01G090400.1	Wheat	mitochondrion	50.91	43.56
TraesCS2B01G090700.1	Wheat	plastid	42.34	41.06

Protein Annotations

Gene3D:1.10.620.20	MapMan:5.1.7.1	InterPro:FADS-2_CS	InterPro:Fatty_acid_desaturase-2	InterPro:Ferritin-like_SF	GO:GO:0003674
GO:GO:0003824	GO:GO:0006629	GO:GO:0006631	GO:GO:0006633	GO:GO:0008150	GO:GO:0008152
GO:GO:0009058	GO:GO:0009987	GO:GO:0016491	GO:GO:0045300	GO:GO:0055114	InterPro:IPR012348
PFAM:PF03405	PIRSF:PIRSF000346	ScanProsite:PS00574	PANTHER:PTHR31155	PANTHER:PTHR31155:SF11	InterPro:RNR-like
SUPFAM:SSF47240	EnsemblPlantsGene:TraesCS5B01G123200	EnsemblPlants:TraesCS5B01G123200.1	TIGR:cd01050	:	:

Description

No Description!

Coordinates

chr5B:+:222354160..222356542

Molecular Weight (calculated)

43685.2 Da

IEP (calculated)

6.430

GRAVY (calculated)

-0.405

Length

385 amino acids

Sequence
(BLAST)

001: MYLMAYMPSC GTFHAPLVSS CLRRKLTVVA TASKAKVGTP EKASTQVRFA QPFPPEKKEV FDSLERWAED NILVLLKPVE KSWQPQDYLP DPSSDGFHDE
101: VKELRERAKE IPDDYLVCLV GDMVTEEALP TYQTMLNILD GGVGDDTGTS PASWAVWTRA WTAEENRHGD LMNKYMYLTG RVDMRQIEKT IQYLLGAGMD
201: PKTEGNPYQG YIYTSFQERA TFISHGNTAR HARKYGDLKL AQICGTIAAD EKRHETAYTK IVEKLFEVDP DYTVLAFAAM MRKKVTMPAH LMYDGQDDNL
301: FEHFSAVAQR LGVYTAIDYA DILDFLVQRW NVANLTGLSG EGRRAQDFLC SLGPRFRKLE ERAQGRAKQL PVVPFSWIHG RQVQL

Best Arabidopsis Sequence Match ( AT2G43710.1 )
(BLAST)

001: MALKFNPLVA SQPYKFPSST RPPTPSFRSP KFLCLASSSP ALSSGPKEVE SLKKPFTPPR EVHVQVLHSM PPQKIEIFKS MENWAEENLL IHLKDVEKSW
101: QPQDFLPDPA SDGFEDQVRE LRERARELPD DYFVVLVGDM ITEEALPTYQ TMLNTLDGVR DETGASPTSW AIWTRAWTAE ENRHGDLLNK YLYLSGRVDM
201: RQIEKTIQYL IGSGMDPRTE NNPYLGFIYT SFQERATFIS HGNTARQAKE HGDIKLAQIC GTIAADEKRH ETAYTKIVEK LFEIDPDGTV MAFADMMRKK
301: ISMPAHLMYD GRNDNLFDNF SSVAQRLGVY TAKDYADILE FLVGRWKIQD LTGLSGEGNK AQDYLCGLAP RIKRLDERAQ ARAKKGPKIP FSWIHDREVQ
401: L

Arabidopsis Description

FAB2Stearoyl-[acyl-carrier-protein] 9-desaturase 7, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:O22832]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.