Subcellular Localization
min:
: max
Winner_takes_all: plastid
Predictor Summary:
Predictor Summary:
- plastid 7
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS2A01G280700.2 | Wheat | plastid | 99.23 | 99.23 |
| TraesCS2D01G279500.2 | Wheat | golgi, plastid | 98.98 | 98.98 |
| Os04t0379900-01 | Rice | plastid | 89.54 | 90.0 |
| EES10606 | Sorghum | plastid | 87.24 | 87.24 |
| HORVU2Hr1G068670.2 | Barley | mitochondrion, plastid | 98.47 | 86.74 |
| Zm00001d025170_P001 | Maize | plastid | 86.22 | 86.22 |
| Zm00001d004019_P001 | Maize | plastid | 85.71 | 85.71 |
| GSMUA_Achr8P00820_001 | Banana | cytosol, nucleus, peroxisome | 35.71 | 85.37 |
| GSMUA_Achr6P27590_001 | Banana | nucleus, peroxisome, plastid | 32.65 | 81.01 |
| TraesCS3B01G463000.1 | Wheat | plastid | 77.3 | 77.1 |
| Solyc06g053480.2.1 | Tomato | plastid | 77.3 | 76.32 |
| PGSC0003DMT400042118 | Potato | plastid | 77.04 | 76.07 |
| PGSC0003DMT400002555 | Potato | plastid | 75.51 | 75.32 |
| GSMUA_Achr7P22860_001 | Banana | plastid | 69.13 | 75.07 |
| VIT_00s0499g00030.t01 | Wine grape | plastid | 75.26 | 75.06 |
| CDY17916 | Canola | plastid | 76.28 | 74.94 |
| Bra000321.1-P | Field mustard | plastid | 75.77 | 74.62 |
| Solyc03g063110.2.1 | Tomato | plastid | 74.74 | 74.55 |
| CDY44250 | Canola | plastid | 75.77 | 74.44 |
| KRH71270 | Soybean | endoplasmic reticulum, nucleus | 74.23 | 74.42 |
| CDX83464 | Canola | plastid | 75.51 | 74.37 |
| AT2G43710.1 | Thale cress | plastid | 76.02 | 74.31 |
| TraesCS5B01G123200.1 | Wheat | plastid | 72.45 | 73.77 |
| VIT_05s0094g00750.t01 | Wine grape | plastid | 60.71 | 73.68 |
| Bra004778.1-P | Field mustard | plastid | 75.26 | 73.57 |
| CDX79807 | Canola | plastid | 75.26 | 73.57 |
| GSMUA_Achr8P08750_001 | Banana | plastid | 65.82 | 73.09 |
| PGSC0003DMT400041874 | Potato | plastid | 73.21 | 73.03 |
| Solyc11g008680.1.1 | Tomato | plastid | 72.96 | 72.77 |
| VIT_12s0034g00180.t01 | Wine grape | cytosol | 19.64 | 72.64 |
| KRH50195 | Soybean | plastid | 74.23 | 72.39 |
| TraesCS5B01G539600.1 | Wheat | plastid | 71.17 | 71.36 |
| GSMUA_Achr5P25160_001 | Banana | plastid | 64.8 | 64.47 |
| VIT_12s0034g00190.t01 | Wine grape | extracellular | 24.49 | 57.48 |
| TraesCS7B01G102300.1 | Wheat | plastid | 50.26 | 48.4 |
| TraesCS5B01G235800.1 | Wheat | plastid | 48.98 | 47.76 |
| TraesCS5B01G235900.1 | Wheat | plastid | 48.72 | 46.93 |
| TraesCS3B01G453200.2 | Wheat | mitochondrion, plastid | 49.74 | 46.54 |
| TraesCS2B01G090400.1 | Wheat | mitochondrion | 51.79 | 45.11 |
| TraesCS2B01G090700.1 | Wheat | plastid | 43.11 | 42.57 |
Protein Annotations
| Gene3D:1.10.620.20 | MapMan:5.1.7.1 | InterPro:FADS-2_CS | InterPro:Fatty_acid_desaturase-2 | InterPro:Ferritin-like_SF | GO:GO:0003674 |
| GO:GO:0003824 | GO:GO:0006629 | GO:GO:0006631 | GO:GO:0006633 | GO:GO:0008150 | GO:GO:0008152 |
| GO:GO:0009058 | GO:GO:0009987 | GO:GO:0016491 | GO:GO:0045300 | GO:GO:0055114 | InterPro:IPR012348 |
| PFAM:PF03405 | PIRSF:PIRSF000346 | ScanProsite:PS00574 | PANTHER:PTHR31155 | PANTHER:PTHR31155:SF11 | InterPro:RNR-like |
| SUPFAM:SSF47240 | EnsemblPlantsGene:TraesCS2B01G298000 | EnsemblPlants:TraesCS2B01G298000.1 | TIGR:cd01050 | SEG:seg | : |
Description
No Description!
Coordinates
chr2B:-:417080145..417084669
Molecular Weight (calculated)
44613.0 Da
IEP (calculated)
6.609
GRAVY (calculated)
-0.496
Length
392 amino acids
Sequence
(BLAST)
(BLAST)
001: MAFRACLPSH KASPSPSVAQ RRASNGAPPV VAMASTMNEV KTAKKPYAPP REVHLQVMHS LPAQKQEIFD SLQSWARDNL LNLLKPVEKS WQPQDFLPDP
101: SSEGFYDEVK ELRERAKEIP DDYFVCLVGD MVTEEALPTY QTMLNTLDGV RDETGASPTA WAVWTRAWTA EENRHGDLLN KYMYLSGRVD MRQIEKTIQY
201: LIGSGMDPGT ENNPYMGFLY TSFQERATFI SHGNTARHAK QFGDLKLAQI CGTIAADEKR HETAYTKIVE KLFEIDPDYT VLAFADMMRK KISMPAHLMY
301: DGEDNNLFEH FSSVAQRLGV YTAKDYADIL EFLVQRWKVA DLTGLSGEGR RSQDYVCTLA TRFRRLDERA QARAKQGPVV PFSWVYDRKV QL
101: SSEGFYDEVK ELRERAKEIP DDYFVCLVGD MVTEEALPTY QTMLNTLDGV RDETGASPTA WAVWTRAWTA EENRHGDLLN KYMYLSGRVD MRQIEKTIQY
201: LIGSGMDPGT ENNPYMGFLY TSFQERATFI SHGNTARHAK QFGDLKLAQI CGTIAADEKR HETAYTKIVE KLFEIDPDYT VLAFADMMRK KISMPAHLMY
301: DGEDNNLFEH FSSVAQRLGV YTAKDYADIL EFLVQRWKVA DLTGLSGEGR RSQDYVCTLA TRFRRLDERA QARAKQGPVV PFSWVYDRKV QL
001: MALKFNPLVA SQPYKFPSST RPPTPSFRSP KFLCLASSSP ALSSGPKEVE SLKKPFTPPR EVHVQVLHSM PPQKIEIFKS MENWAEENLL IHLKDVEKSW
101: QPQDFLPDPA SDGFEDQVRE LRERARELPD DYFVVLVGDM ITEEALPTYQ TMLNTLDGVR DETGASPTSW AIWTRAWTAE ENRHGDLLNK YLYLSGRVDM
201: RQIEKTIQYL IGSGMDPRTE NNPYLGFIYT SFQERATFIS HGNTARQAKE HGDIKLAQIC GTIAADEKRH ETAYTKIVEK LFEIDPDGTV MAFADMMRKK
301: ISMPAHLMYD GRNDNLFDNF SSVAQRLGVY TAKDYADILE FLVGRWKIQD LTGLSGEGNK AQDYLCGLAP RIKRLDERAQ ARAKKGPKIP FSWIHDREVQ
401: L
101: QPQDFLPDPA SDGFEDQVRE LRERARELPD DYFVVLVGDM ITEEALPTYQ TMLNTLDGVR DETGASPTSW AIWTRAWTAE ENRHGDLLNK YLYLSGRVDM
201: RQIEKTIQYL IGSGMDPRTE NNPYLGFIYT SFQERATFIS HGNTARQAKE HGDIKLAQIC GTIAADEKRH ETAYTKIVEK LFEIDPDGTV MAFADMMRKK
301: ISMPAHLMYD GRNDNLFDNF SSVAQRLGVY TAKDYADILE FLVGRWKIQD LTGLSGEGNK AQDYLCGLAP RIKRLDERAQ ARAKKGPKIP FSWIHDREVQ
401: L
Arabidopsis Description
FAB2Stearoyl-[acyl-carrier-protein] 9-desaturase 7, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:O22832]
SUBAcon: [plastid]
SUBAcon: [plastid]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.