Factsheet for TraesCS2B01G090700.1

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

mitochondrion 3
plastid 4

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	mitochondrion, plastid
iPSORT:	mitochondrion
MultiLoc:	mitochondrion
Predotar:	plastid
PProwler:	mitochondrion
TargetP:	plastid
WoLF PSORT:	plastid
YLoc:	plastid

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS2D01G074200.1	Wheat	mitochondrion, plastid	89.92	79.51
TraesCS2A01G075500.1	Wheat	plastid	87.15	77.75
TraesCS2B01G090400.1	Wheat	mitochondrion	85.39	75.33
HORVU2Hr1G012600.2	Barley	mitochondrion	76.57	75.25
HORVU2Hr1G012780.1	Barley	mitochondrion	75.57	74.63
TraesCS7B01G102300.1	Wheat	plastid	57.43	56.02
GSMUA_Achr6P01210_001	Banana	cytosol, endoplasmic reticulum, extracellular, golgi, peroxisome, plasma membrane, plastid, vacuole	34.51	46.92
GSMUA_Achr5P25190_001	Banana	mitochondrion	7.56	45.45
TraesCS2B01G298000.1	Wheat	plastid	42.57	43.11
TraesCS3B01G463000.1	Wheat	plastid	42.32	42.75
AT5G16230.1	Thale cress	plastid	42.82	42.39
TraesCS5B01G123200.1	Wheat	plastid	41.06	42.34
CDY26509	Canola	plastid	42.32	41.69
CDX69460	Canola	plastid	42.32	41.69
Bra008632.1-P	Field mustard	plastid	42.32	41.69
Bra039178.1-P	Field mustard	plastid	41.31	41.52
AT3G02610.2	Thale cress	plastid	43.07	41.4
AT3G02620.2	Thale cress	plastid	42.32	41.38
TraesCS5B01G235800.1	Wheat	plastid	41.81	41.29
TraesCS5B01G235900.1	Wheat	plastid	42.07	41.03
TraesCS3B01G453200.2	Wheat	mitochondrion, plastid	43.07	40.81
TraesCS5B01G539600.1	Wheat	plastid	40.05	40.66
CDY57537	Canola	plastid	41.81	40.59
CDY43232	Canola	plastid	41.56	40.34
PGSC0003DMT400041719	Potato	cytosol, peroxisome, plastid	14.36	39.04

Protein Annotations

Gene3D:1.10.620.20	MapMan:5.1.7.1	InterPro:Fatty_acid_desaturase-2	InterPro:Ferritin-like_SF	GO:GO:0003674	GO:GO:0003824
GO:GO:0006629	GO:GO:0006631	GO:GO:0008150	GO:GO:0008152	GO:GO:0009987	GO:GO:0016491
GO:GO:0045300	GO:GO:0055114	InterPro:IPR012348	PFAM:PF03405	PIRSF:PIRSF000346	PANTHER:PTHR31155
PANTHER:PTHR31155:SF10	InterPro:RNR-like	SUPFAM:SSF47240	EnsemblPlantsGene:TraesCS2B01G090700	EnsemblPlants:TraesCS2B01G090700.1	TIGR:cd01050
SEG:seg	:	:	:	:	:

Description

No Description!

Coordinates

chr2B:+:52123059..52124602

Molecular Weight (calculated)

44438.8 Da

IEP (calculated)

7.358

GRAVY (calculated)

-0.343

Length

397 amino acids

Sequence
(BLAST)

001: MATSQSSWLL RHPCPVSMPW TWNNIGLKVT NITYWRCSRA NNGGRIMADM SISTANCLAQ PAQLQGETPT GRGSAVAARH EEEGTDDEWL MYLEPAKLEP
101: FDHLEPWAEA NVVPLLKPAQ VAWQPTDLLP DLASLGADGF HAACSDIAAR AADLPDAHLV CLVGNMVTEE ALPTYQSIPN RFEAVRDLTG SSATAWARWI
201: RGWSAEENRH GDVLNRYLFL SGRVDMRQVE RTIHNLIHPS RQGARRRGAI AADEKRHELA YTRIVGKLFE IDPDGAVRAL AYMMRRRIVM PASLVTDGRD
301: GDLFGHYAAV AQQAGIYTAS DYRSILEHLI KQWGVEELAA AELSYDGRRA RDYVCSLPKK IYRLEEKAHT RNSKKAQRMT SVSFSWIFDR PINISVA

Best Arabidopsis Sequence Match ( AT3G02610.1 )
(BLAST)

001: MALLLNSTIT VAMKQNPLVA VSFPRTTCLG SSFSPPRLLR VSCVATNPSK TSEETDKKKF RPIKEVPNQV THTITQEKLE IFKSMENWAQ ENLLSYLKPV
101: EASWQPQDFL PETNDEDRFY EQVKELRDRT KEIPDDYFVV LVGDMITEEA LPTYQTTLNT LDGVKDETGG SLTPWAVWVR AWTAEENRHG DLLNKYLYLS
201: GRVDMRHVEK TIQYLIGSGM DSKFENNPYN GFIYTSFQER ATFISHGNTA KLATTYGDTT LAKICGTIAA DEKRHETAYT RIVEKLFEID PDGTVQALAS
301: MMRKRITMPA HLMHDGRDDD LFDHYAAVAQ RIGVYTATDY AGILEFLLRR WEVEKLGMGL SGEGRRAQDY LCTLPQRIRR LEERANDRVK LASKSKPSVS
401: FSWIYGREVE L

Arabidopsis Description

Plant stearoyl-acyl-carrier desaturase family protein [Source:UniProtKB/TrEMBL;Acc:A0A178V7P2]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.