Factsheet for AT3G02620.2

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 9
cytosol 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
AT3G02610.2	Thale cress	plastid	93.35	91.77
Bra039178.1-P	Field mustard	plastid	83.5	85.82
CDY57537	Canola	plastid	85.71	85.09
CDY43232	Canola	plastid	85.22	84.6
AT5G16230.1	Thale cress	plastid	80.05	81.05
GSMUA_Achr5P25190_001	Banana	mitochondrion	10.84	66.67
AT5G16240.1	Thale cress	plastid	63.05	64.97
GSMUA_Achr6P01210_001	Banana	cytosol, endoplasmic reticulum, extracellular, golgi, peroxisome, plasma membrane, plastid, vacuole	46.55	64.73
AT2G43710.1	Thale cress	plastid	63.3	64.09
AT3G02630.1	Thale cress	plastid	62.32	63.89
AT1G43800.1	Thale cress	plastid	55.66	57.8
HORVU7Hr1G040140.1	Barley	cytosol, nucleus, peroxisome	45.57	57.63
Zm00001d030165_P001	Maize	cytosol	46.31	55.95
PGSC0003DMT400041719	Potato	cytosol, peroxisome, plastid	19.46	54.11
TraesCS2D01G074000.1	Wheat	plastid	50.0	50.12
TraesCS2A01G075300.1	Wheat	mitochondrion	49.75	49.51
TraesCS7A01G196500.1	Wheat	plastid	48.52	48.52
TraesCS7B01G102300.1	Wheat	plastid	48.52	48.4
KXG38794	Sorghum	plastid	47.04	48.11
Os08t0200100-01	Rice	plastid	47.78	48.02
HORVU2Hr1G012780.1	Barley	mitochondrion	47.54	48.01
HORVU2Hr1G012600.2	Barley	mitochondrion	47.54	47.77
Zm00001d014498_P001	Maize	plastid	47.54	47.3
Zm00001d024273_P001	Maize	plastid	49.01	46.93
TraesCS5B01G235800.1	Wheat	plastid	46.06	46.52
Os03t0423300-01	Rice	plastid	47.78	46.41
TraesCS3D01G413500.1	Wheat	plastid	47.78	46.41
EER88838	Sorghum	plastid	46.8	46.34
TraesCS5A01G236800.1	Wheat	plastid	45.81	46.04
TraesCS3B01G453200.2	Wheat	mitochondrion, plastid	47.29	45.82
Zm00001d021059_P001	Maize	plastid	46.06	45.72
TraesCS5B01G235900.1	Wheat	plastid	45.81	45.7
KXG24679	Sorghum	plastid	47.54	45.63
TraesCS5A01G237800.1	Wheat	plastid	45.57	45.45
KXG35977	Sorghum	plastid	46.31	45.41
TraesCS3A01G418000.1	Wheat	plastid	46.8	45.35
TraesCS5A01G237000.1	Wheat	plastid	45.07	45.3
TraesCS5D01G244700.1	Wheat	plastid	45.07	44.96
HORVU2Hr1G006990.1	Barley	plastid	45.07	44.74
TraesCS2A01G075500.1	Wheat	plastid	48.52	44.27
TraesCS2B01G090400.1	Wheat	mitochondrion	48.77	44.0
HORVU3Hr1G061520.7	Barley	cytosol, peroxisome	47.04	43.81
HORVU5Hr1G068310.1	Barley	plastid	46.06	43.69
TraesCS2D01G074200.1	Wheat	mitochondrion, plastid	48.03	43.43
HORVU3Hr1G092740.3	Barley	cytosol, peroxisome	47.04	43.41
TraesCS2D01G074100.1	Wheat	mitochondrion	48.03	42.76
TraesCS2B01G090700.1	Wheat	plastid	41.38	42.32
Os08t0199400-01	Rice	plastid	43.6	42.24
TraesCS2A01G075400.1	Wheat	mitochondrion	47.29	42.11
OQU92381	Sorghum	plastid	46.31	41.87
EER91728	Sorghum	mitochondrion, plastid	43.6	41.26
Zm00001d030328_P001	Maize	mitochondrion	43.35	40.55
Os03t0741000-00	Rice	plastid	24.63	33.33
Os06t0503800-00	Rice	plastid	19.7	32.79

Protein Annotations

Gene3D:1.10.620.20	MapMan:5.1.7.1	EntrezGene:820737	UniProt:A0A178VGR6	UniProt:A0A1I9LTN8	ProteinID:AAF32469.1
ProteinID:AEE73840.1	ProteinID:ANM65946.1	ProteinID:ANM65947.1	ArrayExpress:AT3G02620	EnsemblPlantsGene:AT3G02620	RefSeq:AT3G02620
TAIR:AT3G02620	RefSeq:AT3G02620-TAIR-G	EnsemblPlants:AT3G02620.2	Unigene:At.41106	InterPro:Fatty_acid_desaturase-2	InterPro:Ferritin-like_SF
GO:GO:0003674	GO:GO:0003824	GO:GO:0005488	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623
GO:GO:0005737	GO:GO:0006629	GO:GO:0006631	GO:GO:0006633	GO:GO:0008150	GO:GO:0008152
GO:GO:0009058	GO:GO:0009507	GO:GO:0009536	GO:GO:0009987	GO:GO:0016491	GO:GO:0045300
GO:GO:0046872	GO:GO:0055114	GO:GO:0102786	InterPro:IPR012348	RefSeq:NP_001327879.1	RefSeq:NP_001327880.1
RefSeq:NP_186911.2	ProteinID:OAP05570.1	PFAM:PF03405	PIRSF:PIRSF000346	PANTHER:PTHR31155	PANTHER:PTHR31155:SF6
InterPro:RNR-like	SUPFAM:SSF47240	SignalP:SignalP-noTM	UniParc:UPI0007E1D385	:	:

Description

Plant stearoyl-acyl-carrier-protein desaturase family protein [Source:UniProtKB/TrEMBL;Acc:A0A178VGR6]

Coordinates

chr3:+:560182..561979

Molecular Weight (calculated)

46522.4 Da

IEP (calculated)

6.133

GRAVY (calculated)

-0.475

Length

406 amino acids

Sequence
(BLAST)

001: MTMMALLLNS TMTVAMKQNP ATAVSFMQTT CLGSSFSPPR HLQVSCVATN PSKTFRPIKE VSNQVTHTIT QEKLEIFKSM ENWAQENLLS YLKPVETSWQ
101: PQDFLPETKD EDRFYEQVKE LRDRTKEIPD DYFVVLVGDM ITEEALPTYQ TVMNTLDGAK DETGVSLTPW AVWLRAWTAE ENRHGDLLNK YLYLSGRVDT
201: RHVEKTIQYL IGSGMDTKYE NNPYNGYIYT SFQERATFIS HANTAKLATT YGDTTLAKIC GTIAADEKRH EMAYTRIVEK LFEIDPDGTV QALASMMRKR
301: ITMPAQLMHD GRDDNLFDHY AAVAQRIGVY TATDYAGILE FLLRRWEVEK LGMGLSGEGR RAQDYLCTLP QRIRRLEERA DDRVKRASKS KPSVSFSWIY
401: GREVEL

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.