Factsheet for TraesCS5A01G236800.1

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 6
peroxisome 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	peroxisome, plastid
ChloroP:	plastid
iPSORT:	plastid
MultiLoc:	peroxisome
PProwler:	plastid
TargetP:	plastid
WoLF PSORT:	plastid
YLoc:	plastid

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS5D01G244700.1	Wheat	plastid	93.81	93.12
TraesCS5B01G235900.1	Wheat	plastid	92.82	92.14
TraesCS5A01G237000.1	Wheat	plastid	92.08	92.08
TraesCS5A01G237800.1	Wheat	plastid	85.64	85.01
Zm00001d014498_P001	Maize	plastid	60.89	60.29
EER88838	Sorghum	plastid	60.4	59.51
TraesCS3A01G418000.1	Wheat	plastid	61.63	59.43
KXG35977	Sorghum	plastid	60.64	59.18
Zm00001d021059_P001	Maize	plastid	59.16	58.44
GSMUA_Achr6P01210_001	Banana	cytosol, endoplasmic reticulum, extracellular, golgi, peroxisome, plasma membrane, plastid, vacuole	37.62	52.05
TraesCS3A01G408700.1	Wheat	mitochondrion, plastid	45.79	48.94
TraesCS5A01G123600.2	Wheat	plastid	46.53	48.83
TraesCS2A01G280700.2	Wheat	plastid	47.28	48.72
TraesCS7A01G196500.1	Wheat	plastid	48.76	48.52
GSMUA_Achr5P25190_001	Banana	mitochondrion	7.92	48.48
TraesCS2A01G075300.1	Wheat	mitochondrion	48.27	47.79
Bra039178.1-P	Field mustard	plastid	46.04	47.09
CDY26509	Canola	plastid	46.78	46.9
CDX69460	Canola	plastid	46.78	46.9
Bra008632.1-P	Field mustard	plastid	46.78	46.9
AT5G16230.1	Thale cress	plastid	46.53	46.88
CDY57537	Canola	plastid	46.53	45.97
AT3G02620.2	Thale cress	plastid	46.04	45.81
CDY43232	Canola	plastid	46.29	45.72
AT3G02610.2	Thale cress	plastid	46.53	45.52
TraesCS2A01G075500.1	Wheat	plastid	48.02	43.6
TraesCS4A01G326700.1	Wheat	plastid	44.06	43.52
TraesCS2A01G075400.1	Wheat	mitochondrion	47.52	42.11
TraesCS3A01G426800.3	Wheat	plastid	46.04	38.59
PGSC0003DMT400041719	Potato	cytosol, peroxisome, plastid	12.87	35.62

Protein Annotations

Gene3D:1.10.620.20	MapMan:5.1.7.1	InterPro:Fatty_acid_desaturase-2	InterPro:Ferritin-like_SF	GO:GO:0003674	GO:GO:0003824
GO:GO:0006629	GO:GO:0006631	GO:GO:0008150	GO:GO:0008152	GO:GO:0009987	GO:GO:0016491
GO:GO:0045300	GO:GO:0055114	InterPro:IPR012348	PFAM:PF03405	PIRSF:PIRSF000346	PANTHER:PTHR31155
PANTHER:PTHR31155:SF7	InterPro:RNR-like	SUPFAM:SSF47240	EnsemblPlantsGene:TraesCS5A01G236800	EnsemblPlants:TraesCS5A01G236800.1	TIGR:cd01050
SEG:seg	:	:	:	:	:

Description

No Description!

Coordinates

chr5A:-:452209899..452211198

Molecular Weight (calculated)

45336.1 Da

IEP (calculated)

7.132

GRAVY (calculated)

-0.374

Length

404 amino acids

Sequence
(BLAST)

001: MSMLMPFPHG LAMPAQAHPS WCRSRAATRA GGWACKSTAT ARFDNTVTEM RAQEQAEAEV ARTLNLSGWV EEQLLPLLTP VEDAWQPSDL LPCFSLSAAG
101: LSAEQQPSMM MTREELQDQA SSVPDDVLVC LVGNMVTEEA LPTYMCVGNR VVGCNDDTGC SDLPWARWIR GWTAEENRHG DLLNRYLYLS GRVDMRQIER
201: TVHHLLRNGM QMLRPSSPYH NAVYGSFQER ATFISHAHTA KQAARHGDRC LAKICGVVAA DEKRHETAYT KAAAKFFELD PDGMVRALAA VLRDKITMPG
301: QFMTDGRDAD LFEHFSAVAQ RTGVYTARDY GDMVEHFVRR WKVADLGGRQ LSGEGRRAQE YVCGLPRKIR RVEELAHDRA IKAAKDPEFA RFSWVFDRPV
401: CIRA

Best Arabidopsis Sequence Match ( AT3G02620.1 )
(BLAST)

001: MALLLNSTMT VAMKQNPATA VSFMQTTCLG SSFSPPRHLQ VSCVATNPSK TFRPIKEVSN QVTHTITQEK LEIFKSMENW AQENLLSYLK PVETSWQPQD
101: FLPETKDEDR FYEQVKELRD RTKEIPDDYF VVLVGDMITE EALPTYQTVM NTLDGAKDET GVSLTPWAVW LRAWTAEENR HGDLLNKYLY LSGRVDTRHV
201: EKTIQYLIGS GMDTKYENNP YNGYIYTSFQ ERATFISHAN TAKLATTYGD TTLAKICGTI AADEKRHEMA YTRIVEKLFE IDPDGTVQAL ASMMRKRITM
301: PAQLMHDGRD DNLFDHYAAV AQRIGVYTAT DYAGILEFLL RRWEVEKLGM GLSGEGRRAQ DYLCTLPQRI RRLEERADDR VKRASKSKPS VSFSWIYGRE
401: VEL

Arabidopsis Description

Plant stearoyl-acyl-carrier-protein desaturase family protein [Source:UniProtKB/TrEMBL;Acc:A0A178VGR6]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.