Factsheet for AT3G02610.2

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 8
cytosol 1
mitochondrion 2

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
AT3G02620.2	Thale cress	plastid	91.77	93.35
Bra039178.1-P	Field mustard	plastid	86.68	90.63
CDY57537	Canola	plastid	88.62	89.49
CDY43232	Canola	plastid	87.89	88.75
AT5G16230.1	Thale cress	plastid	83.05	85.54
GSMUA_Achr5P25190_001	Banana	mitochondrion	10.9	68.18
AT2G43710.1	Thale cress	plastid	64.41	66.33
AT5G16240.1	Thale cress	plastid	63.2	66.24
AT3G02630.1	Thale cress	plastid	63.2	65.91
GSMUA_Achr6P01210_001	Banana	cytosol, endoplasmic reticulum, extracellular, golgi, peroxisome, plasma membrane, plastid, vacuole	46.49	65.75
HORVU7Hr1G040140.1	Barley	cytosol, nucleus, peroxisome	45.76	58.88
AT1G43800.1	Thale cress	plastid	55.69	58.82
Zm00001d030165_P001	Maize	cytosol	46.49	57.14
PGSC0003DMT400041719	Potato	cytosol, peroxisome, plastid	19.37	54.79
TraesCS2D01G074000.1	Wheat	plastid	51.09	52.1
TraesCS2A01G075300.1	Wheat	mitochondrion	50.85	51.47
TraesCS7A01G196500.1	Wheat	plastid	48.67	49.51
HORVU2Hr1G012600.2	Barley	mitochondrion	48.43	49.51
HORVU2Hr1G012780.1	Barley	mitochondrion	48.18	49.5
KXG38794	Sorghum	plastid	47.46	49.37
TraesCS7B01G102300.1	Wheat	plastid	48.43	49.14
Os08t0200100-01	Rice	plastid	47.94	49.01
Zm00001d024273_P001	Maize	plastid	49.64	48.35
TraesCS5B01G235800.1	Wheat	plastid	45.76	47.01
Zm00001d014498_P001	Maize	plastid	46.25	46.81
KXG24679	Sorghum	plastid	47.94	46.81
TraesCS5A01G236800.1	Wheat	plastid	45.52	46.53
TraesCS5B01G235900.1	Wheat	plastid	45.76	46.44
Os03t0423300-01	Rice	plastid	46.97	46.41
TraesCS3D01G413500.1	Wheat	plastid	46.97	46.41
TraesCS3B01G453200.2	Wheat	mitochondrion, plastid	46.97	46.3
HORVU2Hr1G006990.1	Barley	plastid	45.76	46.21
EER88838	Sorghum	plastid	45.76	46.1
TraesCS5A01G237000.1	Wheat	plastid	45.04	46.04
Zm00001d021059_P001	Maize	plastid	45.28	45.72
TraesCS5D01G244700.1	Wheat	plastid	45.04	45.7
TraesCS5A01G237800.1	Wheat	plastid	45.04	45.7
KXG35977	Sorghum	plastid	45.76	45.65
TraesCS2A01G075500.1	Wheat	plastid	49.15	45.62
TraesCS3A01G418000.1	Wheat	plastid	46.0	45.35
TraesCS2B01G090400.1	Wheat	mitochondrion	49.39	45.33
TraesCS2D01G074200.1	Wheat	mitochondrion, plastid	48.67	44.77
HORVU3Hr1G061520.7	Barley	cytosol, peroxisome	46.73	44.27
HORVU5Hr1G068310.1	Barley	plastid	45.76	44.16
TraesCS2D01G074100.1	Wheat	mitochondrion	48.67	44.08
Os08t0199400-01	Rice	plastid	44.55	43.91
HORVU3Hr1G092740.3	Barley	cytosol, peroxisome	46.73	43.86
TraesCS2A01G075400.1	Wheat	mitochondrion	47.94	43.42
EER91728	Sorghum	mitochondrion, plastid	44.79	43.12
TraesCS2B01G090700.1	Wheat	plastid	41.4	43.07
OQU92381	Sorghum	plastid	46.49	42.76
Zm00001d030328_P001	Maize	mitochondrion	44.31	42.17
Os03t0741000-00	Rice	plastid	24.46	33.67
Os06t0503800-00	Rice	plastid	19.13	32.38

Protein Annotations

Gene3D:1.10.620.20	MapMan:5.1.7.1	EntrezGene:820709	UniProt:A0A178V7P2	UniProt:A0A1I9LPI1	ProteinID:AAF32468.1
ProteinID:AEE73839.2	EMBL:AK176162	ProteinID:ANM64489.1	ArrayExpress:AT3G02610	EnsemblPlantsGene:AT3G02610	RefSeq:AT3G02610
TAIR:AT3G02610	RefSeq:AT3G02610-TAIR-G	EnsemblPlants:AT3G02610.2	Unigene:At.41109	EMBL:BT010447	InterPro:Fatty_acid_desaturase-2
InterPro:Ferritin-like_SF	GO:GO:0000003	GO:GO:0003674	GO:GO:0003824	GO:GO:0005488	GO:GO:0005575
GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0006629	GO:GO:0006631	GO:GO:0006633
GO:GO:0006636	GO:GO:0007275	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009507
GO:GO:0009536	GO:GO:0009791	GO:GO:0009987	GO:GO:0016491	GO:GO:0045300	GO:GO:0046872
GO:GO:0055089	GO:GO:0055114	GO:GO:0102786	GO:GO:2000014	InterPro:IPR012348	RefSeq:NP_001319454.1
RefSeq:NP_186910.2	ProteinID:OAP01794.1	PFAM:PF03405	PIRSF:PIRSF000346	PANTHER:PTHR31155	PANTHER:PTHR31155:SF6
InterPro:RNR-like	SUPFAM:SSF47240	UniParc:UPI00005DC1FA	:	:	:

Description

Plant stearoyl-acyl-carrier desaturase family protein [Source:UniProtKB/TrEMBL;Acc:A0A178V7P2]

Coordinates

chr3:+:555626..557723

Molecular Weight (calculated)

47212.2 Da

IEP (calculated)

6.335

GRAVY (calculated)

-0.481

Length

413 amino acids

Sequence
(BLAST)

001: MKMALLLNST ITVAMKQNPL VAVSFPRTTC LGSSFSPPRL LRVSCVATNP SKTSEETDKK KFRPIKEVPN QVTHTITQEK LEIFKSMENW AQENLLSYLK
101: PVEASWQPQD FLPETNDEDR FYEQVKELRD RTKEIPDDYF VVLVGDMITE EALPTYQTTL NTLDGVKDET GGSLTPWAVW VRAWTAEENR HGDLLNKYLY
201: LSGRVDMRHV EKTIQYLIGS GMDSKFENNP YNGFIYTSFQ ERATFISHGN TAKLATTYGD TTLAKICGTI AADEKRHETA YTRIVEKLFE IDPDGTVQAL
301: ASMMRKRITM PAHLMHDGRD DDLFDHYAAV AQRIGVYTAT DYAGILEFLL RRWEVEKLGM GLSGEGRRAQ DYLCTLPQRI RRLEERANDR VKLASKSKPS
401: VSFSWIYGRE VEL

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.