Factsheet for HORVU2Hr1G012600.2

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

plastid 5
mitochondrion 5

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
HORVU2Hr1G012780.1	Barley	mitochondrion	96.53	97.01
TraesCS2D01G074200.1	Wheat	mitochondrion, plastid	87.13	78.4
TraesCS2A01G075500.1	Wheat	plastid	86.14	78.2
TraesCS2B01G090400.1	Wheat	mitochondrion	86.88	78.0
TraesCS2D01G074100.1	Wheat	mitochondrion	86.88	76.97
TraesCS2B01G090700.1	Wheat	plastid	75.25	76.57
TraesCS2A01G075400.1	Wheat	mitochondrion	85.64	75.88
HORVU7Hr1G040140.1	Barley	cytosol, nucleus, peroxisome	59.16	74.45
HORVU2Hr1G006990.1	Barley	plastid	69.8	68.95
GSMUA_Achr6P01210_001	Banana	cytosol, endoplasmic reticulum, extracellular, golgi, peroxisome, plasma membrane, plastid, vacuole	41.83	57.88
HORVU3Hr1G091320.2	Barley	plastid	47.77	51.06
AT5G16230.1	Thale cress	plastid	48.51	48.88
Bra039178.1-P	Field mustard	plastid	47.77	48.86
HORVU5Hr1G039730.1	Barley	plastid	46.53	48.83
GSMUA_Achr5P25190_001	Banana	mitochondrion	7.92	48.48
AT3G02610.2	Thale cress	plastid	49.51	48.43
CDX69460	Canola	plastid	48.27	48.39
Bra008632.1-P	Field mustard	plastid	48.27	48.39
CDY26509	Canola	plastid	48.02	48.14
AT3G02620.2	Thale cress	plastid	47.77	47.54
CDY57537	Canola	plastid	48.02	47.43
CDY43232	Canola	plastid	47.77	47.19
HORVU5Hr1G123110.1	Barley	mitochondrion, plastid	46.04	46.62
HORVU3Hr1G061520.7	Barley	cytosol, peroxisome	49.75	46.1
HORVU3Hr1G092740.3	Barley	cytosol, peroxisome	49.75	45.68
HORVU5Hr1G068310.1	Barley	plastid	48.27	45.56
HORVU2Hr1G068670.2	Barley	mitochondrion, plastid	48.27	43.82
HORVU3Hr1G094050.3	Barley	plastid	48.76	42.37
PGSC0003DMT400041719	Potato	cytosol, peroxisome, plastid	14.85	41.1

Protein Annotations

Gene3D:1.10.620.20	MapMan:5.1.7.1	InterPro:Fatty_acid_desaturase-2	InterPro:Ferritin-like_SF	GO:GO:0003674	GO:GO:0003824
GO:GO:0005488	GO:GO:0006629	GO:GO:0006631	GO:GO:0008150	GO:GO:0008152	GO:GO:0009987
GO:GO:0016491	GO:GO:0045300	GO:GO:0046872	GO:GO:0055114	EnsemblPlantsGene:HORVU2Hr1G012600	EnsemblPlants:HORVU2Hr1G012600.2
InterPro:IPR012348	UniProt:M0XTT2	PFAM:PF03405	PIRSF:PIRSF000346	PANTHER:PTHR31155	PANTHER:PTHR31155:SF10
InterPro:RNR-like	SUPFAM:SSF47240	UniParc:UPI0002969C94	:	:	:

Description

No Description!

Coordinates

chrchr2H:-:26440476..26441690

Molecular Weight (calculated)

44662.6 Da

IEP (calculated)

8.090

GRAVY (calculated)

-0.215

Length

404 amino acids

Sequence
(BLAST)

001: MKCTLLRIVL ACRRCSSAGD GGRFMAEIAG LGKGSTGTGR RAAVAAKHEE EGTDDEWLMY LKPAKLEVFH HLEPWAEANV VPLLKPAEVA WQPTDLLPDL
101: ASLGADGFHA ACSDITARAA GLPDAHLVCL VGNMVTEEAL PTYQSIPNRF EGVRDLTGSS GTAWARWIRG WSAEENRHGD VLNRYLFLSG RVDMRQVERT
201: IHNLINSGMV MNAARSPYHG FIYVAFQERA TSISHGNTAR RAKEHGDMAL ARICGAIAAD EKRHELAYTR IVGKLFKIDP DGAVRALAYM MRLRIVMPAS
301: LVTDGRDDDL FAHYAAVAQQ AGIYTASDYR SVLEHLIKQW GVEELVAGEL SDEGRRARDY VCALPRKIRR LEEKANLRNG RKAQPMTPVS FSWIVDRPIN
401: ITIG

Best Arabidopsis Sequence Match ( AT3G02610.1 )
(BLAST)

001: MALLLNSTIT VAMKQNPLVA VSFPRTTCLG SSFSPPRLLR VSCVATNPSK TSEETDKKKF RPIKEVPNQV THTITQEKLE IFKSMENWAQ ENLLSYLKPV
101: EASWQPQDFL PETNDEDRFY EQVKELRDRT KEIPDDYFVV LVGDMITEEA LPTYQTTLNT LDGVKDETGG SLTPWAVWVR AWTAEENRHG DLLNKYLYLS
201: GRVDMRHVEK TIQYLIGSGM DSKFENNPYN GFIYTSFQER ATFISHGNTA KLATTYGDTT LAKICGTIAA DEKRHETAYT RIVEKLFEID PDGTVQALAS
301: MMRKRITMPA HLMHDGRDDD LFDHYAAVAQ RIGVYTATDY AGILEFLLRR WEVEKLGMGL SGEGRRAQDY LCTLPQRIRR LEERANDRVK LASKSKPSVS
401: FSWIYGREVE L

Arabidopsis Description

Plant stearoyl-acyl-carrier desaturase family protein [Source:UniProtKB/TrEMBL;Acc:A0A178V7P2]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.