Factsheet for TraesCS2A01G075500.1

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 3
mitochondrion 4
peroxisome 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS2D01G074200.1	Wheat	mitochondrion, plastid	90.56	89.75
HORVU2Hr1G012780.1	Barley	mitochondrion	79.33	87.81
TraesCS2B01G090700.1	Wheat	plastid	77.75	87.15
HORVU2Hr1G012600.2	Barley	mitochondrion	78.2	86.14
TraesCS2A01G075300.1	Wheat	mitochondrion	78.43	85.54
TraesCS2A01G075400.1	Wheat	mitochondrion	86.29	84.21
TraesCS7A01G196500.1	Wheat	plastid	61.12	67.0
GSMUA_Achr6P01210_001	Banana	cytosol, endoplasmic reticulum, extracellular, golgi, peroxisome, plasma membrane, plastid, vacuole	39.78	60.62
GSMUA_Achr5P25190_001	Banana	mitochondrion	8.09	54.55
TraesCS2A01G280700.2	Wheat	plastid	46.29	52.55
TraesCS3A01G408700.1	Wheat	mitochondrion, plastid	43.37	51.06
TraesCS5A01G123600.2	Wheat	plastid	43.82	50.65
AT5G16230.1	Thale cress	plastid	45.17	50.12
CDY26509	Canola	plastid	44.72	49.38
CDX69460	Canola	plastid	44.72	49.38
Bra008632.1-P	Field mustard	plastid	44.72	49.38
Bra039178.1-P	Field mustard	plastid	43.82	49.37
AT3G02610.2	Thale cress	plastid	45.62	49.15
TraesCS5A01G237800.1	Wheat	plastid	44.72	48.89
TraesCS5A01G237000.1	Wheat	plastid	44.27	48.76
AT3G02620.2	Thale cress	plastid	44.27	48.52
TraesCS3A01G418000.1	Wheat	plastid	45.62	48.45
CDY57537	Canola	plastid	44.27	48.17
TraesCS5A01G236800.1	Wheat	plastid	43.6	48.02
CDY43232	Canola	plastid	44.04	47.92
TraesCS4A01G326700.1	Wheat	plastid	43.82	47.68
TraesCS3A01G426800.3	Wheat	plastid	46.07	42.53
PGSC0003DMT400041719	Potato	cytosol, peroxisome, plastid	13.48	41.1

Protein Annotations

Gene3D:1.10.620.20	MapMan:5.1.7.1	InterPro:Fatty_acid_desaturase-2	InterPro:Ferritin-like_SF	GO:GO:0003674	GO:GO:0003824
GO:GO:0006629	GO:GO:0006631	GO:GO:0008150	GO:GO:0008152	GO:GO:0009987	GO:GO:0016491
GO:GO:0045300	GO:GO:0055114	InterPro:IPR012348	PFAM:PF03405	PIRSF:PIRSF000346	PANTHER:PTHR31155
PANTHER:PTHR31155:SF10	InterPro:RNR-like	SUPFAM:SSF47240	EnsemblPlantsGene:TraesCS2A01G075500	EnsemblPlants:TraesCS2A01G075500.1	TIGR:cd01050
SEG:seg	:	:	:	:	:

Description

No Description!

Coordinates

chr2A:-:33562850..33564285

Molecular Weight (calculated)

49521.1 Da

IEP (calculated)

8.034

GRAVY (calculated)

-0.302

Length

445 amino acids

Sequence
(BLAST)

001: MATSQSSWLL RHACPLAMPW TRTGNNIGLQ VTNITYWRCS RANGGRIMAG MTMSTANCLA QPAQLQGEAV QVSKRSTRTG RGAAVAARHE EEGTDDEWLM
101: YLEPAKLEVF DHLEPWAEAN VVPLLKPAEV AWQPTDLLPD LASLGADGFH AACCDIRARA AGLPDAHLVC LVGNMVTEEA LPTYQSIPNR FEAVRDLTGS
201: SGTAWARWIR GWSAEENRHG DVLNKYLFLS GRVDMRQVER TIHNLIQSGM VMNAARSPYH GFIYVAFQER ATSISHGNTA RRAKEHGDLS LARICGAIAA
301: DEKRHELAYT RIVGKLFEID PDGAVRALAY MMRRRIVMPA SLMTDGRDSD LFSQYGAVAQ QAGIYTASDY RSILEHLINQ WGVEELVATG LSDEGRRARD
401: YVCALPRKIR RLEQKAHERN DKKARPTASI PFSWIFDRPV NITMA

Best Arabidopsis Sequence Match ( AT3G02610.1 )
(BLAST)

001: MALLLNSTIT VAMKQNPLVA VSFPRTTCLG SSFSPPRLLR VSCVATNPSK TSEETDKKKF RPIKEVPNQV THTITQEKLE IFKSMENWAQ ENLLSYLKPV
101: EASWQPQDFL PETNDEDRFY EQVKELRDRT KEIPDDYFVV LVGDMITEEA LPTYQTTLNT LDGVKDETGG SLTPWAVWVR AWTAEENRHG DLLNKYLYLS
201: GRVDMRHVEK TIQYLIGSGM DSKFENNPYN GFIYTSFQER ATFISHGNTA KLATTYGDTT LAKICGTIAA DEKRHETAYT RIVEKLFEID PDGTVQALAS
301: MMRKRITMPA HLMHDGRDDD LFDHYAAVAQ RIGVYTATDY AGILEFLLRR WEVEKLGMGL SGEGRRAQDY LCTLPQRIRR LEERANDRVK LASKSKPSVS
401: FSWIYGREVE L

Arabidopsis Description

Plant stearoyl-acyl-carrier desaturase family protein [Source:UniProtKB/TrEMBL;Acc:A0A178V7P2]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.