Factsheet for TraesCS4A01G326700.1

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 7

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	plastid
ChloroP:	plastid
iPSORT:	plastid
MultiLoc:	plastid
PProwler:	plastid
TargetP:	plastid
WoLF PSORT:	plastid
YLoc:	plastid

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS5D01G548700.1	Wheat	plastid	91.2	95.4
HORVU5Hr1G123110.1	Barley	mitochondrion, plastid	91.69	93.98
TraesCS5B01G539600.1	Wheat	plastid	89.49	93.61
TraesCS5A01G123600.2	Wheat	plastid	79.22	84.16
GSMUA_Achr8P00820_001	Banana	cytosol, nucleus, peroxisome	30.56	76.22
GSMUA_Achr6P27590_001	Banana	nucleus, peroxisome, plastid	28.61	74.05
TraesCS2A01G280700.2	Wheat	plastid	69.44	72.45
PGSC0003DMT400002555	Potato	plastid	66.26	68.96
VIT_00s0499g00030.t01	Wine grape	plastid	66.01	68.7
Solyc06g053480.2.1	Tomato	plastid	66.26	68.26
Solyc03g063110.2.1	Tomato	plastid	65.28	67.94
KXG30261	Sorghum	plastid	68.7	67.55
PGSC0003DMT400042118	Potato	plastid	65.53	67.51
KRH71270	Soybean	endoplasmic reticulum, nucleus	63.33	66.24
GSMUA_Achr7P22860_001	Banana	plastid	58.44	66.2
VIT_12s0034g00180.t01	Wine grape	cytosol	17.11	66.04
Solyc11g008680.1.1	Tomato	plastid	63.33	65.9
CDY17916	Canola	plastid	64.06	65.66
PGSC0003DMT400041874	Potato	plastid	63.08	65.65
VIT_05s0094g00750.t01	Wine grape	plastid	51.83	65.63
CDY44250	Canola	plastid	63.81	65.41
Bra000321.1-P	Field mustard	plastid	63.57	65.33
CDX83464	Canola	plastid	63.57	65.33
KRH50195	Soybean	plastid	64.06	65.17
AT2G43710.1	Thale cress	plastid	63.81	65.09
Bra004778.1-P	Field mustard	plastid	63.33	64.59
CDX79807	Canola	plastid	63.33	64.59
GSMUA_Achr8P08750_001	Banana	plastid	55.26	64.02
Zm00001d050552_P001	Maize	plastid	68.22	63.41
Os02t0504800-01	Rice	plastid	48.41	61.49
TraesCS3A01G408700.1	Wheat	mitochondrion, plastid	54.77	59.26
GSMUA_Achr5P25160_001	Banana	plastid	55.75	57.87
TraesCS3A01G426800.3	Wheat	plastid	65.53	55.6
VIT_12s0034g00190.t01	Wine grape	extracellular	21.52	52.69
TraesCS2A01G075300.1	Wheat	mitochondrion	48.66	48.77
TraesCS7A01G196500.1	Wheat	plastid	46.7	47.04
TraesCS3A01G418000.1	Wheat	plastid	47.19	46.06
TraesCS5A01G237800.1	Wheat	plastid	44.5	44.72
TraesCS5A01G237000.1	Wheat	plastid	43.77	44.31
TraesCS5A01G236800.1	Wheat	plastid	43.52	44.06
TraesCS2A01G075500.1	Wheat	plastid	47.68	43.82
TraesCS2A01G075400.1	Wheat	mitochondrion	46.7	41.89

Protein Annotations

Gene3D:1.10.620.20	MapMan:5.1.7.1	InterPro:FADS-2_CS	InterPro:Fatty_acid_desaturase-2	InterPro:Ferritin-like_SF	GO:GO:0003674
GO:GO:0003824	GO:GO:0006629	GO:GO:0006631	GO:GO:0006633	GO:GO:0008150	GO:GO:0008152
GO:GO:0009058	GO:GO:0009987	GO:GO:0016491	GO:GO:0045300	GO:GO:0055114	InterPro:IPR012348
PFAM:PF03405	PIRSF:PIRSF000346	ScanProsite:PS00574	PANTHER:PTHR31155	PANTHER:PTHR31155:SF11	InterPro:RNR-like
SUPFAM:SSF47240	EnsemblPlantsGene:TraesCS4A01G326700	EnsemblPlants:TraesCS4A01G326700.1	TIGR:cd01050	:	:

Description

No Description!

Coordinates

chr4A:-:613581481..613582994

Molecular Weight (calculated)

46534.5 Da

IEP (calculated)

7.633

GRAVY (calculated)

-0.485

Length

409 amino acids

Sequence
(BLAST)

001: MNHTISVCKH PSNRKRPTMH LMASLPSRGA SQAPLWSSCP RSKITVMAMA STAKDGVPGK AFSPRKAPHR DRVAHSLPPE KREIFDSLNS WAEDNILVLL
101: KPVERSWQPQ DYLPDPSSDR FYDEVKELRE RAEEIPDEYL VCLVGDMVTE EALPTYQKML NILDGGVRDE TGSSPTSWAV WTRAWTAEEN RHGDLMNKYI
201: YLTGRADMRQ VEKTIQYLVG AGMDPKTEAN PYEFFIYTSF QERATFISHG NTARHARKYG DQKLAQICGT IAADERRHEL AYTKIVEKLF EVDPDYTVLA
301: FASIMKKKIT MPAHLMYDGQ EDNLFEHFSA VAQRLGVYTA MDYADILEFL VQRWNVAGLT GLSGEGRRAQ DYLCSLGPRF RKLVERAQGS GKQLPVVPFS
401: WIYGRQVQL

Best Arabidopsis Sequence Match ( AT2G43710.1 )
(BLAST)

001: MALKFNPLVA SQPYKFPSST RPPTPSFRSP KFLCLASSSP ALSSGPKEVE SLKKPFTPPR EVHVQVLHSM PPQKIEIFKS MENWAEENLL IHLKDVEKSW
101: QPQDFLPDPA SDGFEDQVRE LRERARELPD DYFVVLVGDM ITEEALPTYQ TMLNTLDGVR DETGASPTSW AIWTRAWTAE ENRHGDLLNK YLYLSGRVDM
201: RQIEKTIQYL IGSGMDPRTE NNPYLGFIYT SFQERATFIS HGNTARQAKE HGDIKLAQIC GTIAADEKRH ETAYTKIVEK LFEIDPDGTV MAFADMMRKK
301: ISMPAHLMYD GRNDNLFDNF SSVAQRLGVY TAKDYADILE FLVGRWKIQD LTGLSGEGNK AQDYLCGLAP RIKRLDERAQ ARAKKGPKIP FSWIHDREVQ
401: L

Arabidopsis Description

FAB2Stearoyl-[acyl-carrier-protein] 9-desaturase 7, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:O22832]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.