Subcellular Localization
min:
: max
Winner_takes_all: plastid
Predictor Summary:
Predictor Summary:
- plastid 4
- mitochondrion 2
- extracellular 2
- endoplasmic reticulum 2
- vacuole 2
- plasma membrane 2
- golgi 2
Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
locus | Identity | Homology Identity |
---|
Ortholog
locus | Homology Species | Location | Identity | Homology Identity |
---|---|---|---|---|
TraesCS3D01G421700.1 | Wheat | plastid | 75.93 | 93.37 |
TraesCS3B01G463000.1 | Wheat | plastid | 75.93 | 93.13 |
GSMUA_Achr8P00820_001 | Banana | cytosol, nucleus, peroxisome | 29.46 | 86.59 |
Zm00001d012033_P002 | Maize | mitochondrion | 68.88 | 84.69 |
Os01t0919900-01 | Rice | plastid | 69.92 | 84.25 |
EES04113 | Sorghum | plastid | 69.09 | 83.88 |
HORVU3Hr1G094050.3 | Barley | plastid | 78.22 | 81.08 |
GSMUA_Achr6P27590_001 | Banana | nucleus, peroxisome, plastid | 26.35 | 80.38 |
Zm00001d042344_P002 | Maize | plastid | 68.67 | 80.34 |
Solyc06g053480.2.1 | Tomato | plastid | 63.28 | 76.83 |
TraesCS2A01G280700.2 | Wheat | plastid | 62.24 | 76.53 |
VIT_12s0034g00180.t01 | Wine grape | cytosol | 16.8 | 76.42 |
PGSC0003DMT400042118 | Potato | plastid | 62.45 | 75.82 |
CDY44250 | Canola | plastid | 62.45 | 75.44 |
Solyc03g063110.2.1 | Tomato | plastid | 61.41 | 75.32 |
PGSC0003DMT400002555 | Potato | plastid | 61.41 | 75.32 |
Bra000321.1-P | Field mustard | plastid | 62.03 | 75.13 |
CDX83464 | Canola | plastid | 62.03 | 75.13 |
CDX79807 | Canola | plastid | 62.45 | 75.06 |
Bra004778.1-P | Field mustard | plastid | 62.24 | 74.81 |
VIT_00s0499g00030.t01 | Wine grape | plastid | 61.0 | 74.81 |
KRH71270 | Soybean | endoplasmic reticulum, nucleus | 60.58 | 74.68 |
CDY17916 | Canola | plastid | 61.62 | 74.44 |
AT2G43710.1 | Thale cress | plastid | 61.62 | 74.06 |
VIT_05s0094g00750.t01 | Wine grape | plastid | 49.59 | 73.99 |
GSMUA_Achr7P22860_001 | Banana | plastid | 55.39 | 73.96 |
KRH50195 | Soybean | plastid | 61.41 | 73.63 |
Solyc11g008680.1.1 | Tomato | plastid | 58.92 | 72.26 |
GSMUA_Achr8P08750_001 | Banana | plastid | 52.9 | 72.24 |
PGSC0003DMT400041874 | Potato | plastid | 58.71 | 72.01 |
TraesCS5A01G123600.2 | Wheat | plastid | 56.43 | 70.65 |
GSMUA_Achr5P25160_001 | Banana | plastid | 53.94 | 65.99 |
TraesCS4A01G326700.1 | Wheat | plastid | 55.6 | 65.53 |
TraesCS3A01G408700.1 | Wheat | mitochondrion, plastid | 50.21 | 64.02 |
VIT_12s0034g00190.t01 | Wine grape | extracellular | 21.58 | 62.28 |
TraesCS2A01G075300.1 | Wheat | mitochondrion | 42.95 | 50.74 |
TraesCS7A01G196500.1 | Wheat | plastid | 40.25 | 47.78 |
TraesCS5A01G237000.1 | Wheat | plastid | 38.8 | 46.29 |
TraesCS2A01G075500.1 | Wheat | plastid | 42.53 | 46.07 |
TraesCS5A01G236800.1 | Wheat | plastid | 38.59 | 46.04 |
TraesCS5A01G237800.1 | Wheat | plastid | 38.8 | 45.95 |
TraesCS3A01G418000.1 | Wheat | plastid | 39.83 | 45.82 |
TraesCS2A01G075400.1 | Wheat | mitochondrion | 41.91 | 44.3 |
Protein Annotations
Gene3D:1.10.620.20 | MapMan:5.1.7.1 | InterPro:Fatty_acid_desaturase-2 | InterPro:Ferritin-like_SF | GO:GO:0003674 | GO:GO:0003824 |
GO:GO:0006629 | GO:GO:0006631 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009987 | GO:GO:0016491 |
GO:GO:0045300 | GO:GO:0055114 | InterPro:IPR012348 | PFAM:PF03405 | PIRSF:PIRSF000346 | PANTHER:PTHR31155 |
PANTHER:PTHR31155:SF11 | InterPro:RNR-like | SUPFAM:SSF47240 | SignalP:SignalP-noTM | EnsemblPlantsGene:TraesCS3A01G426800 | EnsemblPlants:TraesCS3A01G426800.3 |
TIGR:cd01050 | SEG:seg | : | : | : | : |
Description
No Description!
Coordinates
chr3A:-:669729419..669733220
Molecular Weight (calculated)
54678.6 Da
IEP (calculated)
7.709
GRAVY (calculated)
-0.348
Length
482 amino acids
Sequence
(BLAST)
(BLAST)
001: MAAAVPLILL LRSGANTTVV EAEPLPFNFL RAQATSFPVR IDPSPEPPAP MVRFAFPPHR TRTADRQSVR STLNSAGAFM LRAASVTVAS HPIPEWLRAR
101: YHSHAVVSIN CLLFQYWPAG GRVRGSRWFR IESKKTFAPP KEVHVQVTHS MPPQKMEIFQ SLDGWARDNL LLHLKPVEKC WQPQDFLPDP ASDGFHDEVK
201: ELRERAKEIP DDYLVCLVGD MITEEALPTY QTMLNTLDGV RDETGASPTA WAVWTRAWTA EENRHGDLLN KYLYLTGRVD MRQIEKTIQY LIGSGMDPRT
301: ENNPYLGFIY TSFQERATFI SHGNTARHAK DFGDLKLAQI CGIIASDEKR HETAYTKIVE KLFEIDPDGT VLALADMMRK KIAMPAHLMF DGQDEKLFDH
401: FSMVAQRLGV YTARDYADIL EFLVGRWKVP ELTGLSGEGH KAQDYLCTLA GRIRKLDERA QSRAKQAGKM PFSWVYGREV QM
101: YHSHAVVSIN CLLFQYWPAG GRVRGSRWFR IESKKTFAPP KEVHVQVTHS MPPQKMEIFQ SLDGWARDNL LLHLKPVEKC WQPQDFLPDP ASDGFHDEVK
201: ELRERAKEIP DDYLVCLVGD MITEEALPTY QTMLNTLDGV RDETGASPTA WAVWTRAWTA EENRHGDLLN KYLYLTGRVD MRQIEKTIQY LIGSGMDPRT
301: ENNPYLGFIY TSFQERATFI SHGNTARHAK DFGDLKLAQI CGIIASDEKR HETAYTKIVE KLFEIDPDGT VLALADMMRK KIAMPAHLMF DGQDEKLFDH
401: FSMVAQRLGV YTARDYADIL EFLVGRWKVP ELTGLSGEGH KAQDYLCTLA GRIRKLDERA QSRAKQAGKM PFSWVYGREV QM
001: MAMAMDRIVF SPSSYVYRPC QARGSRSSRV SMASTIRSAT TEVTNGRKLY IPPREVHVQV KHSMPPQKLE IFKSLEGWAD ETLLTYLKPV EKSWQPTDFL
101: PEPESEGFYD QVKELRERCK ELPDDYFVVL VGDMITEEAL PTYQTMLNTL DGVRDETGAS PTPWAIWTRA WTAEENRHGD LLNKYLYLSG RVDMRQIEKT
201: IQYLIGSGMD PKTENNPYLG FIYTSFQERA TFISHGNTAR LAKDRGDLKL AQICGTIAAD ERRHETAYTK IVEKLFEIDP DGTILGLADM MKKKISMPAH
301: LMYDGQDDNL FEHFSTVAQR LGVYTAKDYA DILEFLVERW NVETLTDLSS EGHRAQDFVC GLPARIRKIE ERAQGRAKEA AKNIPFSWIF GRNIRA
101: PEPESEGFYD QVKELRERCK ELPDDYFVVL VGDMITEEAL PTYQTMLNTL DGVRDETGAS PTPWAIWTRA WTAEENRHGD LLNKYLYLSG RVDMRQIEKT
201: IQYLIGSGMD PKTENNPYLG FIYTSFQERA TFISHGNTAR LAKDRGDLKL AQICGTIAAD ERRHETAYTK IVEKLFEIDP DGTILGLADM MKKKISMPAH
301: LMYDGQDDNL FEHFSTVAQR LGVYTAKDYA DILEFLVERW NVETLTDLSS EGHRAQDFVC GLPARIRKIE ERAQGRAKEA AKNIPFSWIF GRNIRA
Arabidopsis Description
S-ACP-DES5Stearoyl-[acyl-carrier-protein] 9-desaturase 5, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q9M879]
SUBAcon: [plastid]
SUBAcon: [plastid]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.