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Wheat
Subcellular Localization
min:
: max

 
Winner_takes_all: plastid

Predictor Summary:
  • plastid 4
  • mitochondrion 2
  • extracellular 2
  • endoplasmic reticulum 2
  • vacuole 2
  • plasma membrane 2
  • golgi 2
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
TraesCS3D01G421700.1 Wheat plastid 75.93 93.37
TraesCS3B01G463000.1 Wheat plastid 75.93 93.13
GSMUA_Achr8P00820_001 Banana cytosol, nucleus, peroxisome 29.46 86.59
Zm00001d012033_P002 Maize mitochondrion 68.88 84.69
Os01t0919900-01 Rice plastid 69.92 84.25
EES04113 Sorghum plastid 69.09 83.88
HORVU3Hr1G094050.3 Barley plastid 78.22 81.08
GSMUA_Achr6P27590_001 Banana nucleus, peroxisome, plastid 26.35 80.38
Zm00001d042344_P002 Maize plastid 68.67 80.34
Solyc06g053480.2.1 Tomato plastid 63.28 76.83
TraesCS2A01G280700.2 Wheat plastid 62.24 76.53
VIT_12s0034g00180.t01 Wine grape cytosol 16.8 76.42
PGSC0003DMT400042118 Potato plastid 62.45 75.82
CDY44250 Canola plastid 62.45 75.44
Solyc03g063110.2.1 Tomato plastid 61.41 75.32
PGSC0003DMT400002555 Potato plastid 61.41 75.32
Bra000321.1-P Field mustard plastid 62.03 75.13
CDX83464 Canola plastid 62.03 75.13
CDX79807 Canola plastid 62.45 75.06
Bra004778.1-P Field mustard plastid 62.24 74.81
VIT_00s0499g00030.t01 Wine grape plastid 61.0 74.81
KRH71270 Soybean endoplasmic reticulum, nucleus 60.58 74.68
CDY17916 Canola plastid 61.62 74.44
AT2G43710.1 Thale cress plastid 61.62 74.06
VIT_05s0094g00750.t01 Wine grape plastid 49.59 73.99
GSMUA_Achr7P22860_001 Banana plastid 55.39 73.96
KRH50195 Soybean plastid 61.41 73.63
Solyc11g008680.1.1 Tomato plastid 58.92 72.26
GSMUA_Achr8P08750_001 Banana plastid 52.9 72.24
PGSC0003DMT400041874 Potato plastid 58.71 72.01
TraesCS5A01G123600.2 Wheat plastid 56.43 70.65
GSMUA_Achr5P25160_001 Banana plastid 53.94 65.99
TraesCS4A01G326700.1 Wheat plastid 55.6 65.53
TraesCS3A01G408700.1 Wheat mitochondrion, plastid 50.21 64.02
VIT_12s0034g00190.t01 Wine grape extracellular 21.58 62.28
TraesCS2A01G075300.1 Wheat mitochondrion 42.95 50.74
TraesCS7A01G196500.1 Wheat plastid 40.25 47.78
TraesCS5A01G237000.1 Wheat plastid 38.8 46.29
TraesCS2A01G075500.1 Wheat plastid 42.53 46.07
TraesCS5A01G236800.1 Wheat plastid 38.59 46.04
TraesCS5A01G237800.1 Wheat plastid 38.8 45.95
TraesCS3A01G418000.1 Wheat plastid 39.83 45.82
TraesCS2A01G075400.1 Wheat mitochondrion 41.91 44.3
Protein Annotations
Gene3D:1.10.620.20MapMan:5.1.7.1InterPro:Fatty_acid_desaturase-2InterPro:Ferritin-like_SFGO:GO:0003674GO:GO:0003824
GO:GO:0006629GO:GO:0006631GO:GO:0008150GO:GO:0008152GO:GO:0009987GO:GO:0016491
GO:GO:0045300GO:GO:0055114InterPro:IPR012348PFAM:PF03405PIRSF:PIRSF000346PANTHER:PTHR31155
PANTHER:PTHR31155:SF11InterPro:RNR-likeSUPFAM:SSF47240SignalP:SignalP-noTMEnsemblPlantsGene:TraesCS3A01G426800EnsemblPlants:TraesCS3A01G426800.3
TIGR:cd01050SEG:seg::::
Description
No Description!
Coordinates
chr3A:-:669729419..669733220
Molecular Weight (calculated)
54678.6 Da
IEP (calculated)
7.709
GRAVY (calculated)
-0.348
Length
482 amino acids
Sequence
(BLAST)
001: MAAAVPLILL LRSGANTTVV EAEPLPFNFL RAQATSFPVR IDPSPEPPAP MVRFAFPPHR TRTADRQSVR STLNSAGAFM LRAASVTVAS HPIPEWLRAR
101: YHSHAVVSIN CLLFQYWPAG GRVRGSRWFR IESKKTFAPP KEVHVQVTHS MPPQKMEIFQ SLDGWARDNL LLHLKPVEKC WQPQDFLPDP ASDGFHDEVK
201: ELRERAKEIP DDYLVCLVGD MITEEALPTY QTMLNTLDGV RDETGASPTA WAVWTRAWTA EENRHGDLLN KYLYLTGRVD MRQIEKTIQY LIGSGMDPRT
301: ENNPYLGFIY TSFQERATFI SHGNTARHAK DFGDLKLAQI CGIIASDEKR HETAYTKIVE KLFEIDPDGT VLALADMMRK KIAMPAHLMF DGQDEKLFDH
401: FSMVAQRLGV YTARDYADIL EFLVGRWKVP ELTGLSGEGH KAQDYLCTLA GRIRKLDERA QSRAKQAGKM PFSWVYGREV QM
Best Arabidopsis Sequence Match ( AT3G02630.1 )
(BLAST)
001: MAMAMDRIVF SPSSYVYRPC QARGSRSSRV SMASTIRSAT TEVTNGRKLY IPPREVHVQV KHSMPPQKLE IFKSLEGWAD ETLLTYLKPV EKSWQPTDFL
101: PEPESEGFYD QVKELRERCK ELPDDYFVVL VGDMITEEAL PTYQTMLNTL DGVRDETGAS PTPWAIWTRA WTAEENRHGD LLNKYLYLSG RVDMRQIEKT
201: IQYLIGSGMD PKTENNPYLG FIYTSFQERA TFISHGNTAR LAKDRGDLKL AQICGTIAAD ERRHETAYTK IVEKLFEIDP DGTILGLADM MKKKISMPAH
301: LMYDGQDDNL FEHFSTVAQR LGVYTAKDYA DILEFLVERW NVETLTDLSS EGHRAQDFVC GLPARIRKIE ERAQGRAKEA AKNIPFSWIF GRNIRA
Arabidopsis Description
S-ACP-DES5Stearoyl-[acyl-carrier-protein] 9-desaturase 5, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q9M879]
SUBAcon: [plastid]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.