Subcellular Localization
min:
: max
Winner_takes_all: extracellular
Predictor Summary:
Predictor Summary:
- extracellular 5
- endoplasmic reticulum 3
- vacuole 4
- plasma membrane 3
- golgi 3
- plastid 3
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| VIT_12s0034g00180.t01 | Wine grape | cytosol | 50.9 | 80.19 |
| VIT_02s0012g02500.t01 | Wine grape | cytosol | 19.76 | 48.53 |
| VIT_05s0094g00750.t01 | Wine grape | plastid | 73.65 | 38.08 |
| GSMUA_Achr8P08750_001 | Banana | plastid | 70.66 | 33.43 |
| GSMUA_Achr7P22860_001 | Banana | plastid | 67.07 | 31.02 |
| KRH71270 | Soybean | endoplasmic reticulum, nucleus | 70.06 | 29.92 |
| Solyc06g053480.2.1 | Tomato | plastid | 70.06 | 29.47 |
| GSMUA_Achr8P00820_001 | Banana | cytosol, nucleus, peroxisome | 28.74 | 29.27 |
| VIT_00s0499g00030.t01 | Wine grape | plastid | 68.86 | 29.26 |
| PGSC0003DMT400042118 | Potato | plastid | 69.46 | 29.22 |
| AT2G43710.1 | Thale cress | plastid | 70.06 | 29.18 |
| KRH50195 | Soybean | plastid | 70.06 | 29.1 |
| CDY44250 | Canola | plastid | 69.46 | 29.07 |
| Bra000321.1-P | Field mustard | plastid | 68.86 | 28.89 |
| CDX83464 | Canola | plastid | 68.86 | 28.89 |
| VIT_05s0094g00730.t01 | Wine grape | plastid | 62.28 | 28.73 |
| Bra004778.1-P | Field mustard | plastid | 68.86 | 28.68 |
| CDX79807 | Canola | plastid | 68.86 | 28.68 |
| VIT_05s0094g00740.t01 | Wine grape | plastid | 61.08 | 28.57 |
| CDY17916 | Canola | plastid | 68.26 | 28.57 |
| VIT_05s0094g00550.t01 | Wine grape | cytosol | 44.31 | 28.35 |
| GSMUA_Achr5P25160_001 | Banana | plastid | 65.27 | 27.66 |
| VIT_05s0094g00580.t01 | Wine grape | plastid | 59.88 | 27.62 |
| Zm00001d012033_P002 | Maize | mitochondrion | 64.07 | 27.3 |
| GSMUA_Achr6P27590_001 | Banana | nucleus, peroxisome, plastid | 25.75 | 27.22 |
| EES04113 | Sorghum | plastid | 64.67 | 27.2 |
| Os02t0504800-01 | Rice | plastid | 52.1 | 27.02 |
| Os01t0919900-01 | Rice | plastid | 64.67 | 27.0 |
| TraesCS3D01G421700.1 | Wheat | plastid | 61.68 | 26.28 |
| TraesCS3B01G463000.1 | Wheat | plastid | 61.68 | 26.21 |
| Zm00001d042344_P002 | Maize | plastid | 64.07 | 25.97 |
| EES10606 | Sorghum | plastid | 58.08 | 24.74 |
| Zm00001d004019_P001 | Maize | plastid | 58.08 | 24.74 |
| Zm00001d025170_P001 | Maize | plastid | 58.08 | 24.74 |
| Os04t0379900-01 | Rice | plastid | 57.48 | 24.62 |
| TraesCS2D01G279500.2 | Wheat | golgi, plastid | 57.48 | 24.49 |
| TraesCS2A01G280700.2 | Wheat | plastid | 57.48 | 24.49 |
| TraesCS2B01G298000.1 | Wheat | plastid | 57.48 | 24.49 |
| TraesCS5A01G123600.2 | Wheat | plastid | 52.1 | 22.6 |
| TraesCS5D01G548700.1 | Wheat | plastid | 52.69 | 22.51 |
| TraesCS5B01G539600.1 | Wheat | plastid | 52.69 | 22.51 |
| KXG30261 | Sorghum | plastid | 55.69 | 22.36 |
| HORVU3Hr1G094050.3 | Barley | plastid | 61.68 | 22.15 |
| HORVU5Hr1G039730.1 | Barley | plastid | 50.9 | 22.08 |
| TraesCS5D01G131500.1 | Wheat | plastid | 50.3 | 21.99 |
| TraesCS5B01G123200.1 | Wheat | plastid | 50.3 | 21.82 |
| HORVU5Hr1G123110.1 | Barley | mitochondrion, plastid | 52.1 | 21.8 |
| VIT_18s0001g15460.t01 | Wine grape | plastid | 50.3 | 21.59 |
| TraesCS3A01G426800.3 | Wheat | plastid | 62.28 | 21.58 |
| HORVU2Hr1G068670.2 | Barley | mitochondrion, plastid | 57.48 | 21.57 |
| TraesCS4A01G326700.1 | Wheat | plastid | 52.69 | 21.52 |
| Zm00001d050552_P001 | Maize | plastid | 55.09 | 20.91 |
| VIT_07s0005g03820.t01 | Wine grape | nucleus, peroxisome, plastid | 32.93 | 20.6 |
| VIT_00s0327g00070.t01 | Wine grape | cytosol, peroxisome, plastid | 7.19 | 19.67 |
| VIT_05s0094g00650.t01 | Wine grape | plastid | 47.31 | 19.6 |
| VIT_10s0003g04810.t01 | Wine grape | cytosol | 12.57 | 17.5 |
| VIT_05s0094g00630.t01 | Wine grape | plastid | 16.17 | 16.07 |
Protein Annotations
| Gene3D:1.10.620.20 | MapMan:5.1.7.1 | ProteinID:CCB48780 | ProteinID:CCB48780.1 | UniProt:F6H987 | EMBL:FN595497 |
| InterPro:Fatty_acid_desaturase-2 | InterPro:Ferritin-like_SF | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0006629 | GO:GO:0006631 |
| GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009987 | GO:GO:0016491 | GO:GO:0045300 | GO:GO:0055114 |
| InterPro:IPR012348 | PFAM:PF03405 | PANTHER:PTHR31155 | PANTHER:PTHR31155:SF9 | InterPro:RNR-like | SUPFAM:SSF47240 |
| UniParc:UPI000210A0E3 | ArrayExpress:VIT_12s0034g00190 | EnsemblPlantsGene:VIT_12s0034g00190 | EnsemblPlants:VIT_12s0034g00190.t01 | : | : |
Description
No Description!
Coordinates
chr12:+:15655687..15656878
Molecular Weight (calculated)
19305.2 Da
IEP (calculated)
7.136
GRAVY (calculated)
-0.262
Length
167 amino acids
Sequence
(BLAST)
(BLAST)
001: MDLSLHLIIK NHILASFLFH FSGCENLKKP FSPPQEAHVQ ATHSMPTQKI EILKSMENWV EHNILVHLNL DETGASLTSW AIWIRAWTVE ENRHGDLLNK
101: YLYPSGRVDM RHIEKTIQYS IGLGMGPWIE NNPYLGFIYT SFRERATFIS HDNIARLAKE HGDIKLA
101: YLYPSGRVDM RHIEKTIQYS IGLGMGPWIE NNPYLGFIYT SFRERATFIS HDNIARLAKE HGDIKLA
001: MALKFNPLVA SQPYKFPSST RPPTPSFRSP KFLCLASSSP ALSSGPKEVE SLKKPFTPPR EVHVQVLHSM PPQKIEIFKS MENWAEENLL IHLKDVEKSW
101: QPQDFLPDPA SDGFEDQVRE LRERARELPD DYFVVLVGDM ITEEALPTYQ TMLNTLDGVR DETGASPTSW AIWTRAWTAE ENRHGDLLNK YLYLSGRVDM
201: RQIEKTIQYL IGSGMDPRTE NNPYLGFIYT SFQERATFIS HGNTARQAKE HGDIKLAQIC GTIAADEKRH ETAYTKIVEK LFEIDPDGTV MAFADMMRKK
301: ISMPAHLMYD GRNDNLFDNF SSVAQRLGVY TAKDYADILE FLVGRWKIQD LTGLSGEGNK AQDYLCGLAP RIKRLDERAQ ARAKKGPKIP FSWIHDREVQ
401: L
101: QPQDFLPDPA SDGFEDQVRE LRERARELPD DYFVVLVGDM ITEEALPTYQ TMLNTLDGVR DETGASPTSW AIWTRAWTAE ENRHGDLLNK YLYLSGRVDM
201: RQIEKTIQYL IGSGMDPRTE NNPYLGFIYT SFQERATFIS HGNTARQAKE HGDIKLAQIC GTIAADEKRH ETAYTKIVEK LFEIDPDGTV MAFADMMRKK
301: ISMPAHLMYD GRNDNLFDNF SSVAQRLGVY TAKDYADILE FLVGRWKIQD LTGLSGEGNK AQDYLCGLAP RIKRLDERAQ ARAKKGPKIP FSWIHDREVQ
401: L
Arabidopsis Description
FAB2Stearoyl-[acyl-carrier-protein] 9-desaturase 7, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:O22832]
SUBAcon: [plastid]
SUBAcon: [plastid]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.