Factsheet for Zm00001d050552_P001

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 7
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	mitochondrion, plastid
ChloroP:	plastid
iPSORT:	mitochondrion
MultiLoc:	plastid
Predotar:	plastid
PProwler:	plastid
TargetP:	plastid
WoLF PSORT:	plastid
YLoc:	plastid

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KXG30261	Sorghum	plastid	83.41	88.22
GSMUA_Achr8P00820_001	Banana	cytosol, nucleus, peroxisome	27.95	75.0
GSMUA_Achr6P27590_001	Banana	nucleus, peroxisome, plastid	26.36	73.42
Zm00001d004019_P001	Maize	plastid	64.55	72.45
Zm00001d025170_P001	Maize	plastid	64.09	71.94
TraesCS5D01G131500.1	Wheat	plastid	62.05	71.47
TraesCS5B01G123200.1	Wheat	plastid	62.5	71.43
HORVU5Hr1G039730.1	Barley	plastid	62.5	71.43
TraesCS5A01G123600.2	Wheat	plastid	62.27	71.17
TraesCS5D01G548700.1	Wheat	plastid	62.73	70.59
TraesCS5B01G539600.1	Wheat	plastid	62.05	69.82
Zm00001d012033_P002	Maize	mitochondrion	61.82	69.39
PGSC0003DMT400002555	Potato	plastid	61.82	69.21
KRH71270	Soybean	endoplasmic reticulum, nucleus	61.14	68.8
PGSC0003DMT400042118	Potato	plastid	62.05	68.77
Solyc06g053480.2.1	Tomato	plastid	62.05	68.77
Os02t0504800-01	Rice	plastid	50.23	68.63
VIT_00s0499g00030.t01	Wine grape	plastid	61.14	68.45
Solyc03g063110.2.1	Tomato	plastid	61.14	68.45
KRH50195	Soybean	plastid	62.5	68.41
TraesCS4A01G326700.1	Wheat	plastid	63.41	68.22
CDY17916	Canola	plastid	61.59	67.92
Bra000321.1-P	Field mustard	plastid	61.36	67.84
CDX83464	Canola	plastid	61.36	67.84
VIT_05s0094g00750.t01	Wine grape	plastid	49.77	67.8
HORVU5Hr1G123110.1	Barley	mitochondrion, plastid	61.14	67.42
CDY44250	Canola	plastid	61.14	67.42
AT2G43710.1	Thale cress	plastid	61.36	67.33
Bra004778.1-P	Field mustard	plastid	61.14	67.08
CDX79807	Canola	plastid	61.14	67.08
VIT_12s0034g00180.t01	Wine grape	cytosol	16.14	66.98
GSMUA_Achr8P08750_001	Banana	plastid	53.41	66.57
Zm00001d042344_P002	Maize	plastid	62.27	66.5
GSMUA_Achr7P22860_001	Banana	plastid	54.32	66.2
PGSC0003DMT400041874	Potato	plastid	58.86	65.9
Solyc11g008680.1.1	Tomato	plastid	58.64	65.65
Zm00001d012221_P001	Maize	plastid	54.32	62.89
GSMUA_Achr5P25160_001	Banana	plastid	54.32	60.66
VIT_12s0034g00190.t01	Wine grape	extracellular	20.91	55.09
Zm00001d030165_P001	Maize	cytosol	41.14	53.87
Zm00001d024273_P001	Maize	plastid	45.23	46.93
Zm00001d014498_P001	Maize	plastid	41.36	44.61
Zm00001d021059_P001	Maize	plastid	41.14	44.25
Zm00001d030328_P001	Maize	mitochondrion	40.91	41.47
Zm00001d025262_P001	Maize	mitochondrion, plastid	19.77	20.52

Protein Annotations

Gene3D:1.10.620.20	EntrezGene:100272745	MapMan:5.1.7.1	ProteinID:AQK52703.1	InterPro:FADS-2_CS	InterPro:Fatty_acid_desaturase-2
InterPro:Ferritin-like_SF	GO:GO:0003674	GO:GO:0003824	GO:GO:0005488	GO:GO:0005575	GO:GO:0005622
GO:GO:0005623	GO:GO:0005737	GO:GO:0006629	GO:GO:0006631	GO:GO:0006633	GO:GO:0008150
GO:GO:0008152	GO:GO:0009058	GO:GO:0009507	GO:GO:0009536	GO:GO:0009987	GO:GO:0016491
GO:GO:0045300	GO:GO:0046872	GO:GO:0055114	InterPro:IPR012348	UniProt:K7UVL6	PFAM:PF03405
PIRSF:PIRSF000346	ScanProsite:PS00574	PANTHER:PTHR31155	PANTHER:PTHR31155:SF8	InterPro:RNR-like	SUPFAM:SSF47240
UniParc:UPI0001BA6DAA	EnsemblPlantsGene:Zm00001d050552	EnsemblPlants:Zm00001d050552_P001	EnsemblPlants:Zm00001d050552_T001	SEG:seg	:

Description

stearoyl-acyl-carrier-protein desaturase6 stearoyl-acyl-carrier-protein desaturase6

Coordinates

chr4:-:99666954..99668828

Molecular Weight (calculated)

49593.7 Da

IEP (calculated)

7.581

GRAVY (calculated)

-0.428

Length

440 amino acids

Sequence
(BLAST)

001: MATVTSLSFS GSCRHGPRYT ARPAASSRSS QLLNDQLARA SRRLQVAAGM AVAAFPSCGA FAPPCLVSTR RAFSSVVAMA SAAPVRAPSR KPFAPPREVH
101: RPVAHSLPPQ KREIFESLES WAADNILVLL KPVERSWQPQ DYLPDAASES FDDEVRELRE RAREIPDDYF VCFVGDMVTE EALPTYQTML NTLDGGVRDE
201: TGASSTSWAV WTRAWAAEEN RHGDLMNKYL FLTGRVDMRQ IEKTVQYLIA SGMDPKTETN PYMGFVYTSF QERATFISHG NTARHARRYG DTKLAQICGT
301: IAADEKRHES AYERIVEKLF EVDPDYTVRA FADTMRKKVA MPAHLMYDGQ DDGLFARFSA VAQRIGVYTA RDYVDILEFL VRRWGVQELT GLSGEGRRAQ
401: EFVCELGPRF RRLEERAHDN KAKDPEFAPF SWIHGRQVQL

Best Arabidopsis Sequence Match ( AT2G43710.1 )
(BLAST)

001: MALKFNPLVA SQPYKFPSST RPPTPSFRSP KFLCLASSSP ALSSGPKEVE SLKKPFTPPR EVHVQVLHSM PPQKIEIFKS MENWAEENLL IHLKDVEKSW
101: QPQDFLPDPA SDGFEDQVRE LRERARELPD DYFVVLVGDM ITEEALPTYQ TMLNTLDGVR DETGASPTSW AIWTRAWTAE ENRHGDLLNK YLYLSGRVDM
201: RQIEKTIQYL IGSGMDPRTE NNPYLGFIYT SFQERATFIS HGNTARQAKE HGDIKLAQIC GTIAADEKRH ETAYTKIVEK LFEIDPDGTV MAFADMMRKK
301: ISMPAHLMYD GRNDNLFDNF SSVAQRLGVY TAKDYADILE FLVGRWKIQD LTGLSGEGNK AQDYLCGLAP RIKRLDERAQ ARAKKGPKIP FSWIHDREVQ
401: L

Arabidopsis Description

FAB2Stearoyl-[acyl-carrier-protein] 9-desaturase 7, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:O22832]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.