Factsheet for Zm00001d025262_P001

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion, plastid

Predictor Summary:

plastid 3
mitochondrion 4

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
VIT_00s0327g00070.t01	Wine grape	cytosol, peroxisome, plastid	8.73	60.66
VIT_02s0012g02500.t01	Wine grape	cytosol	4.95	30.88
Zm00001d012033_P002	Maize	mitochondrion	24.53	26.53
Zm00001d042344_P002	Maize	plastid	24.76	25.49
Zm00001d025170_P001	Maize	plastid	23.35	25.26
Zm00001d004019_P001	Maize	plastid	23.11	25.0
Zm00001d012221_P001	Maize	plastid	20.05	22.37
Zm00001d050552_P001	Maize	plastid	20.52	19.77
Zm00001d030165_P001	Maize	cytosol	15.57	19.64
Zm00001d024273_P001	Maize	plastid	17.22	17.22
Zm00001d021059_P001	Maize	plastid	16.27	16.87
OQU85014	Sorghum	plastid, vacuole	14.86	16.71
Zm00001d014498_P001	Maize	plastid	16.04	16.67
Zm00001d030328_P001	Maize	mitochondrion	16.27	15.9

Protein Annotations

Gene3D:1.10.620.20	MapMan:5.1.7.1	ProteinID:AQK43332.1	InterPro:Fatty_acid_desaturase-2	InterPro:Ferritin-like_SF	GO:GO:0003674
GO:GO:0003700	GO:GO:0003824	GO:GO:0006139	GO:GO:0006355	GO:GO:0006629	GO:GO:0006631
GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009987	GO:GO:0016491	GO:GO:0045300
GO:GO:0055114	InterPro:IPR012348	UniProt:K7U2U1	PFAM:PF03405	PANTHER:PTHR31155	PANTHER:PTHR31155:SF11
InterPro:RNR-like	SUPFAM:SSF47240	UniParc:UPI000220A51D	EnsemblPlantsGene:Zm00001d025262	EnsemblPlants:Zm00001d025262_P001	EnsemblPlants:Zm00001d025262_T001
SEG:seg	:	:	:	:	:

Description

Stearoyl-[acyl-carrier-protein] 9-desaturase 7 chloroplastic

Coordinates

chr10:+:111717816..111722054

Molecular Weight (calculated)

47144.5 Da

IEP (calculated)

9.467

GRAVY (calculated)

-0.424

Length

424 amino acids

Sequence
(BLAST)

001: MGLGSSKATA MGSGRRQAVL LHLRRRAHTF PFIPSVPFPP PSPDQAGLVL PVTGVSALPP PPHLPGHGPP RQRRPPGDIP SPYATSLFPP GRWDLGAARP
101: PQWDLRATKG PPPSSATISY LPFPPLRPLP TTITPPSGPT AARPAGGRFC SANSSPSSWT CPTIDGVRWR LTLWRYRPPC NALVRNHSFM LLLGVGTDVI
201: RFDLSPRSKM CCYNWLGVKF SFALCNENNF HTFYFLEQEN NLGLSFKYPI FYMSTQGNCE THGARVPGKF DEDERVQVLT IVKKDEPADD IVDRINPRIV
301: AGHRWSGKYE AHLWDSSCRV EGRRRKGKQD MITEEALPTY QTMLNTLDGV RDETGNTAYR AKDFGDLKLT QICGIIASNE KRHETVYTKI MEKLFEIDPD
401: GTVVALANMM DLMGRTTSYL NTSP

Best Arabidopsis Sequence Match ( AT2G43710.1 )
(BLAST)

001: MALKFNPLVA SQPYKFPSST RPPTPSFRSP KFLCLASSSP ALSSGPKEVE SLKKPFTPPR EVHVQVLHSM PPQKIEIFKS MENWAEENLL IHLKDVEKSW
101: QPQDFLPDPA SDGFEDQVRE LRERARELPD DYFVVLVGDM ITEEALPTYQ TMLNTLDGVR DETGASPTSW AIWTRAWTAE ENRHGDLLNK YLYLSGRVDM
201: RQIEKTIQYL IGSGMDPRTE NNPYLGFIYT SFQERATFIS HGNTARQAKE HGDIKLAQIC GTIAADEKRH ETAYTKIVEK LFEIDPDGTV MAFADMMRKK
301: ISMPAHLMYD GRNDNLFDNF SSVAQRLGVY TAKDYADILE FLVGRWKIQD LTGLSGEGNK AQDYLCGLAP RIKRLDERAQ ARAKKGPKIP FSWIHDREVQ
401: L

Arabidopsis Description

FAB2Stearoyl-[acyl-carrier-protein] 9-desaturase 7, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:O22832]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.