Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 1
- plastid 2
- peroxisome 1
- mitochondrion 1
- cytosol 2
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| VIT_12s0034g00180.t01 | Wine grape | cytosol | 52.94 | 33.96 |
| VIT_10s0003g04810.t01 | Wine grape | cytosol | 45.59 | 25.83 |
| VIT_07s0005g03820.t01 | Wine grape | nucleus, peroxisome, plastid | 88.24 | 22.47 |
| VIT_12s0034g00190.t01 | Wine grape | extracellular | 48.53 | 19.76 |
| VIT_05s0094g00550.t01 | Wine grape | cytosol | 72.06 | 18.77 |
| VIT_18s0001g15460.t01 | Wine grape | plastid | 97.06 | 16.97 |
| VIT_05s0094g00750.t01 | Wine grape | plastid | 79.41 | 16.72 |
| VIT_05s0094g00740.t01 | Wine grape | plastid | 75.0 | 14.29 |
| VIT_05s0094g00580.t01 | Wine grape | plastid | 75.0 | 14.09 |
| VIT_05s0094g00730.t01 | Wine grape | plastid | 73.53 | 13.81 |
| VIT_00s0499g00030.t01 | Wine grape | plastid | 79.41 | 13.74 |
| VIT_05s0094g00650.t01 | Wine grape | plastid | 73.53 | 12.41 |
| VIT_05s0094g00630.t01 | Wine grape | plastid | 20.59 | 8.33 |
| OQU85014 | Sorghum | plastid, vacuole | 39.71 | 7.16 |
| Zm00001d025262_P001 | Maize | mitochondrion, plastid | 30.88 | 4.95 |
| VIT_00s0327g00070.t01 | Wine grape | cytosol, peroxisome, plastid | 0.0 | 0.0 |
Protein Annotations
| Gene3D:1.10.620.20 | MapMan:5.1.7.1 | ProteinID:CCB57835 | ProteinID:CCB57835.1 | UniProt:F6HT25 | EMBL:FN596247 |
| InterPro:Fatty_acid_desaturase-2 | InterPro:Ferritin-like_SF | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0006629 | GO:GO:0006631 |
| GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009987 | GO:GO:0016491 | GO:GO:0045300 | GO:GO:0055114 |
| InterPro:IPR012348 | PFAM:PF03405 | PANTHER:PTHR31155 | PANTHER:PTHR31155:SF3 | InterPro:RNR-like | SUPFAM:SSF47240 |
| UniParc:UPI00021096C9 | ArrayExpress:VIT_02s0012g02500 | EnsemblPlantsGene:VIT_02s0012g02500 | EnsemblPlants:VIT_02s0012g02500.t01 | : | : |
Description
No Description!
Coordinates
chr2:+:9560531..9563757
Molecular Weight (calculated)
7925.5 Da
IEP (calculated)
4.969
GRAVY (calculated)
-0.463
Length
68 amino acids
Sequence
(BLAST)
(BLAST)
1: MITEDALLTY QTMINTLDGV RDEMGASASP WAKWTRSWTA EENRHGDLLR TYLYLSGRVD MRMIERTV
001: MLAHKSLLSF TTQWATLMPS PSTFLASRPR GPAKISAVAA PVRPALKHQN KIHTMPPEKM EIFKSLDGWA KDQILPLLKP VDQCWQPASF LPDPALPFSE
101: FTDQVRELRE RTASLPDEYF VVLVGDMITE DALPTYQTMI NTLDGVRDET GASESAWASW TRAWTAEENR HGDLLRTYLY LSGRVDMLMV ERTVQHLIGS
201: GMDPGTENNP YLGFVYTSFQ ERATFVSHGN TARLAKSAGD PVLARICGTI AADEKRHENA YVRIVEKLLE IDPNGAVSAV ADMMRKKITM PAHLMTDGRD
301: PMLFEHFSAV AQRLEVYTAD DYADILEFLV GRWRLEKLEG LTGEGQRAQE FVCGLAQRIR RLQERADERA KKLKKTHEVC FSWIFDKQIS V
101: FTDQVRELRE RTASLPDEYF VVLVGDMITE DALPTYQTMI NTLDGVRDET GASESAWASW TRAWTAEENR HGDLLRTYLY LSGRVDMLMV ERTVQHLIGS
201: GMDPGTENNP YLGFVYTSFQ ERATFVSHGN TARLAKSAGD PVLARICGTI AADEKRHENA YVRIVEKLLE IDPNGAVSAV ADMMRKKITM PAHLMTDGRD
301: PMLFEHFSAV AQRLEVYTAD DYADILEFLV GRWRLEKLEG LTGEGQRAQE FVCGLAQRIR RLQERADERA KKLKKTHEVC FSWIFDKQIS V
Arabidopsis Description
S-ACP-DES6Stearoyl-[acyl-carrier-protein] 9-desaturase 6, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q84VY3]
SUBAcon: [plastid]
SUBAcon: [plastid]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.