Factsheet for Zm00001d012221_P001

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 5
mitochondrion 3

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
EES01858	Sorghum	mitochondrion, plastid	95.26	95.26
Os01t0880800-01	Rice	plastid	87.63	87.4
TraesCS3A01G408700.1	Wheat	mitochondrion, plastid	86.32	86.77
HORVU3Hr1G091320.2	Barley	plastid	86.05	86.51
TraesCS3D01G403800.1	Wheat	plastid	86.84	86.39
GSMUA_Achr8P32640_001	Banana	cytosol	60.26	83.88
GSMUA_Achr7P03060_001	Banana	plastid	62.63	75.56
KRH15948	Soybean	cytosol, nucleus	63.95	72.11
Solyc06g059700.2.1	Tomato	cytosol	26.32	70.42
AT1G43800.1	Thale cress	plastid	69.74	67.77
VIT_18s0001g15460.t01	Wine grape	plastid	69.21	67.61
VIT_10s0003g04810.t01	Wine grape	cytosol	21.32	67.5
PGSC0003DMT400079078	Potato	cytoskeleton, peroxisome, plastid	45.79	66.92
Zm00001d025170_P001	Maize	plastid	66.32	64.29
Zm00001d004019_P001	Maize	plastid	66.05	64.03
PGSC0003DMT400013389	Potato	cytosol	43.16	63.32
KRH18113	Soybean	plastid	62.37	62.7
PGSC0003DMT400079076	Potato	cytosol, peroxisome, plastid	20.79	61.72
Zm00001d012033_P002	Maize	mitochondrion	63.42	61.48
Solyc06g054670.1.1	Tomato	plastid	61.32	61.48
Solyc01g009960.2.1	Tomato	plastid	48.68	61.46
PGSC0003DMT400079085	Potato	plastid	62.37	61.24
PGSC0003DMT400079075	Potato	plastid	62.37	60.77
PGSC0003DMT400095159	Potato	plastid	60.53	59.9
Zm00001d042344_P002	Maize	plastid	63.68	58.74
Solyc06g059720.2.1	Tomato	plastid	59.74	58.66
Zm00001d030165_P001	Maize	cytosol	51.84	58.63
Solyc06g059710.2.1	Tomato	plastid	58.95	57.88
KRH18114	Soybean	cytosol	55.26	56.0
Zm00001d050552_P001	Maize	plastid	62.89	54.32
VIT_07s0005g03820.t01	Wine grape	nucleus, peroxisome, plastid	34.47	49.06
Zm00001d024273_P001	Maize	plastid	54.47	48.82
PGSC0003DMT400079080	Potato	plastid	27.63	47.73
Zm00001d014498_P001	Maize	plastid	48.95	45.59
Zm00001d021059_P001	Maize	plastid	48.16	44.74
Zm00001d030328_P001	Maize	mitochondrion	47.63	41.71
Zm00001d025262_P001	Maize	mitochondrion, plastid	22.37	20.05

Protein Annotations

Gene3D:1.10.620.20	EntrezGene:100273826	MapMan:5.1.7.1	ProteinID:AQK99120.1	UniProt:B6UI69	EMBL:BT041873
EMBL:EU976934	InterPro:Fatty_acid_desaturase-2	InterPro:Ferritin-like_SF	GO:GO:0003674	GO:GO:0003824	GO:GO:0005488
GO:GO:0005575	GO:GO:0006629	GO:GO:0006631	GO:GO:0008150	GO:GO:0008152	GO:GO:0009987
GO:GO:0016020	GO:GO:0016491	GO:GO:0045300	GO:GO:0046872	GO:GO:0055114	InterPro:IPR012348
PFAM:PF03405	PIRSF:PIRSF000346	PANTHER:PTHR31155	PANTHER:PTHR31155:SF6	InterPro:RNR-like	SUPFAM:SSF47240
UniParc:UPI00000496DC	EnsemblPlantsGene:Zm00001d012221	EnsemblPlants:Zm00001d012221_P001	EnsemblPlants:Zm00001d012221_T001	SEG:seg	:

Description

stearoyl-acyl-carrier-protein desaturase9 stearoyl-acyl-carrier-protein desaturase9

Coordinates

chr8:-:170366926..170368457

Molecular Weight (calculated)

42450.8 Da

IEP (calculated)

7.059

GRAVY (calculated)

-0.340

Length

380 amino acids

Sequence
(BLAST)

001: MQAHGIAIRA RGPVAATQAP ARRRQCRVSA AAVGAPAARA RVTHSMPPEK AEVFRSLEGW AARSLLPLLK PVEECWQPAD FLPDSSSEMF GHEVRELRAR
101: AAGLPDEYFV VLVGDMVTEE ALPTYQTMIN TLDGVRDETG ASNCPWAVWT RAWTAEENRH GDILGKYMYL SGRVDMRMVE KTVQYLIGSG MDPGTENNPY
201: LGFVYTSFQE RATAVSHGNT ARLARAHGDD VLARACGTIA ADEKRHETAY GRIVEQLLQL DPEGAVLAVA DMMRKRITMP AHLMHDGRDM DLFEHFAAVA
301: QRLGVYTARD YADIVEFLVK RWKLETLESG LSGEGRRARD FVCGLAPRMR RAAERAEDRA KKDEPRMVKF SWIFDREAVV

Best Arabidopsis Sequence Match ( AT1G43800.1 )
(BLAST)

001: MLAHKSLLSF TTQWATLMPS PSTFLASRPR GPAKISAVAA PVRPALKHQN KIHTMPPEKM EIFKSLDGWA KDQILPLLKP VDQCWQPASF LPDPALPFSE
101: FTDQVRELRE RTASLPDEYF VVLVGDMITE DALPTYQTMI NTLDGVRDET GASESAWASW TRAWTAEENR HGDLLRTYLY LSGRVDMLMV ERTVQHLIGS
201: GMDPGTENNP YLGFVYTSFQ ERATFVSHGN TARLAKSAGD PVLARICGTI AADEKRHENA YVRIVEKLLE IDPNGAVSAV ADMMRKKITM PAHLMTDGRD
301: PMLFEHFSAV AQRLEVYTAD DYADILEFLV GRWRLEKLEG LTGEGQRAQE FVCGLAQRIR RLQERADERA KKLKKTHEVC FSWIFDKQIS V

Arabidopsis Description

S-ACP-DES6Stearoyl-[acyl-carrier-protein] 9-desaturase 6, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q84VY3]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.