CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

plastid 1
cytosol 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion
BaCelLo:	plastid
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH15948	Soybean	cytosol, nucleus	66.93	74.48
KRH18113	Soybean	plastid	66.93	66.4
GSMUA_Achr8P32640_001	Banana	cytosol	48.0	65.93
Solyc06g059700.2.1	Tomato	cytosol	24.0	63.38
VIT_18s0001g15460.t01	Wine grape	plastid	63.73	61.44
PGSC0003DMT400079078	Potato	cytoskeleton, peroxisome, plastid	41.07	59.23
AT1G43800.1	Thale cress	plastid	60.53	58.06
EES01858	Sorghum	mitochondrion, plastid	56.53	55.79
Zm00001d012221_P001	Maize	plastid	56.0	55.26
HORVU3Hr1G091320.2	Barley	plastid	55.47	55.03
TraesCS3D01G403800.1	Wheat	plastid	55.47	54.45
PGSC0003DMT400013389	Potato	cytosol	37.6	54.44
TraesCS3A01G408700.1	Wheat	mitochondrion, plastid	54.67	54.23
GSMUA_Achr7P03060_001	Banana	plastid	45.33	53.97
Os01t0880800-01	Rice	plastid	54.4	53.54
KRH71270	Soybean	endoplasmic reticulum, nucleus	54.93	52.69
PGSC0003DMT400079085	Potato	plastid	53.33	51.68
PGSC0003DMT400079076	Potato	cytosol, peroxisome, plastid	17.6	51.56
Solyc01g009960.2.1	Tomato	plastid	41.33	51.49
KRH50195	Soybean	plastid	55.2	51.49
PGSC0003DMT400095159	Potato	plastid	52.0	50.78
PGSC0003DMT400079075	Potato	plastid	52.8	50.77
Solyc06g054670.1.1	Tomato	plastid	51.2	50.66
Solyc06g059720.2.1	Tomato	plastid	51.73	50.13
Solyc06g059710.2.1	Tomato	plastid	49.87	48.32
PGSC0003DMT400079080	Potato	plastid	24.53	41.82

Protein Annotations

Gene3D:1.10.620.20	MapMan:5.1.7.1	UniProt:A0A0R0GQ01	EMBL:ACUP02008031	ncoils:Coil	InterPro:FADS-2_CS
InterPro:Fatty_acid_desaturase-2	InterPro:Ferritin-like_SF	EnsemblPlantsGene:GLYMA_13G038700	GO:GO:0003674	GO:GO:0003824	GO:GO:0005488
GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0006629	GO:GO:0006631
GO:GO:0006633	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009507	GO:GO:0009536
GO:GO:0009987	GO:GO:0016491	GO:GO:0045300	GO:GO:0046872	GO:GO:0055114	InterPro:IPR012348
EnsemblPlants:KRH18114	ProteinID:KRH18114	ProteinID:KRH18114.1	PFAM:PF03405	PIRSF:PIRSF000346	ScanProsite:PS00574
PANTHER:PTHR31155	PANTHER:PTHR31155:SF3	InterPro:RNR-like	SUPFAM:SSF47240	UniParc:UPI0006ED516F	:

Description

hypothetical protein

Coordinates

chr13:-:12002911..12008557

Molecular Weight (calculated)

43748.6 Da

IEP (calculated)

6.135

GRAVY (calculated)

-0.406

Length

375 amino acids

Sequence
(BLAST)

001: MAPEKIEIFK SLEGWASQQV LPLLKPVEQI RNFFIGIFYL IENRPLAIDS KQAINHIKRK YELENMEIVN KEKEKVRYDF LVFVECNFHQ HDFVPNSSLP
101: FKEFTDEVRA LRERTMELPD EYFVVLVGDM ITEEALPTYQ TTMNNLDGVR DEYGACQSPW AVWTRAWSVE ENRHGDLLKT YMYLSGRVDM ERVEKTIHYL
201: IASGWDVGME NNPYLGFVYT SFQERATFVA HGNTARLAKE GGDPVLARIC DTRTQVDPTG AMLAIGKMMQ KKIIMPAHLM YDGDDPRLFE HYSAVAQRIG
301: VYTANDYANI LDFLVGRWRL EKLESLTAEG KRAQDYVCEL PPRIRKLQER ADERARKMKP NSFKFNWIFN KELLL

Best Arabidopsis Sequence Match ( AT1G43800.1 )
(BLAST)

001: MLAHKSLLSF TTQWATLMPS PSTFLASRPR GPAKISAVAA PVRPALKHQN KIHTMPPEKM EIFKSLDGWA KDQILPLLKP VDQCWQPASF LPDPALPFSE
101: FTDQVRELRE RTASLPDEYF VVLVGDMITE DALPTYQTMI NTLDGVRDET GASESAWASW TRAWTAEENR HGDLLRTYLY LSGRVDMLMV ERTVQHLIGS
201: GMDPGTENNP YLGFVYTSFQ ERATFVSHGN TARLAKSAGD PVLARICGTI AADEKRHENA YVRIVEKLLE IDPNGAVSAV ADMMRKKITM PAHLMTDGRD
301: PMLFEHFSAV AQRLEVYTAD DYADILEFLV GRWRLEKLEG LTGEGQRAQE FVCGLAQRIR RLQERADERA KKLKKTHEVC FSWIFDKQIS V

Arabidopsis Description

S-ACP-DES6Stearoyl-[acyl-carrier-protein] 9-desaturase 6, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q84VY3]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.