Subcellular Localization
min:
: max
Winner_takes_all: plastid
Predictor Summary:
Predictor Summary:
- plastid 5
- mitochondrion 3
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS3A01G408700.1 | Wheat | mitochondrion, plastid | 95.55 | 96.56 |
| HORVU3Hr1G091320.2 | Barley | plastid | 95.55 | 96.56 |
| EES01858 | Sorghum | mitochondrion, plastid | 86.65 | 87.11 |
| Zm00001d012221_P001 | Maize | plastid | 86.39 | 86.84 |
| Os01t0880800-01 | Rice | plastid | 84.29 | 84.51 |
| GSMUA_Achr8P32640_001 | Banana | cytosol | 58.64 | 82.05 |
| GSMUA_Achr7P03060_001 | Banana | plastid | 60.99 | 73.97 |
| KRH15948 | Soybean | cytosol, nucleus | 63.09 | 71.51 |
| Solyc06g059700.2.1 | Tomato | cytosol | 25.65 | 69.01 |
| VIT_18s0001g15460.t01 | Wine grape | plastid | 69.63 | 68.38 |
| VIT_10s0003g04810.t01 | Wine grape | cytosol | 20.94 | 66.67 |
| PGSC0003DMT400079078 | Potato | cytoskeleton, peroxisome, plastid | 45.03 | 66.15 |
| AT1G43800.1 | Thale cress | plastid | 66.75 | 65.22 |
| TraesCS2D01G279500.2 | Wheat | golgi, plastid | 64.4 | 62.76 |
| KRH18113 | Soybean | plastid | 61.52 | 62.17 |
| PGSC0003DMT400013389 | Potato | cytosol | 42.15 | 62.16 |
| TraesCS3D01G421700.1 | Wheat | plastid | 63.61 | 61.99 |
| Solyc06g054670.1.1 | Tomato | plastid | 60.73 | 61.21 |
| PGSC0003DMT400079076 | Potato | cytosol, peroxisome, plastid | 20.42 | 60.94 |
| Solyc01g009960.2.1 | Tomato | plastid | 47.64 | 60.47 |
| PGSC0003DMT400079085 | Potato | plastid | 60.99 | 60.21 |
| PGSC0003DMT400079075 | Potato | plastid | 60.73 | 59.49 |
| PGSC0003DMT400095159 | Potato | plastid | 58.9 | 58.59 |
| TraesCS5D01G131500.1 | Wheat | plastid | 58.38 | 58.38 |
| Solyc06g059720.2.1 | Tomato | plastid | 58.64 | 57.88 |
| Solyc06g059710.2.1 | Tomato | plastid | 57.85 | 57.11 |
| TraesCS5D01G548700.1 | Wheat | plastid | 57.59 | 56.27 |
| KRH18114 | Soybean | cytosol | 54.45 | 55.47 |
| TraesCS2D01G074000.1 | Wheat | plastid | 51.31 | 48.4 |
| VIT_07s0005g03820.t01 | Wine grape | nucleus, peroxisome, plastid | 33.51 | 47.94 |
| PGSC0003DMT400079080 | Potato | plastid | 27.23 | 47.27 |
| TraesCS3D01G413500.1 | Wheat | plastid | 51.57 | 47.13 |
| TraesCS5D01G244700.1 | Wheat | plastid | 48.95 | 45.95 |
| TraesCS2D01G074200.1 | Wheat | mitochondrion, plastid | 50.52 | 42.98 |
| TraesCS2D01G074100.1 | Wheat | mitochondrion | 50.79 | 42.54 |
Protein Annotations
| Gene3D:1.10.620.20 | MapMan:5.1.7.1 | InterPro:Fatty_acid_desaturase-2 | InterPro:Ferritin-like_SF | GO:GO:0003674 | GO:GO:0003824 |
| GO:GO:0005575 | GO:GO:0006629 | GO:GO:0006631 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009987 |
| GO:GO:0016020 | GO:GO:0016491 | GO:GO:0045300 | GO:GO:0055114 | InterPro:IPR012348 | PFAM:PF03405 |
| PIRSF:PIRSF000346 | PANTHER:PTHR31155 | PANTHER:PTHR31155:SF6 | InterPro:RNR-like | SUPFAM:SSF47240 | EnsemblPlantsGene:TraesCS3D01G403800 |
| EnsemblPlants:TraesCS3D01G403800.1 | TIGR:cd01050 | SEG:seg | : | : | : |
Description
No Description!
Coordinates
chr3D:-:517811495..517812736
Molecular Weight (calculated)
42803.3 Da
IEP (calculated)
6.860
GRAVY (calculated)
-0.312
Length
382 amino acids
Sequence
(BLAST)
(BLAST)
001: MQAQGILRVP GHLPTALPLP RRQCRRVSAA AAVAAAAPSV QRGVTHSMPP EKAEVFQSLR GWAAGSLLPL LRPVEDIWQP ADFLPDSSSE MFEHEVRELR
101: ARAAALPDEY FVVLVGDMVT EEALPTYQTM INTLDGVRDE TGASACPWAV WTRAWTAEEN RHGDVLNKYM YLSGRVDMRM VEKTVQYLIG SGMDPRTENN
201: PYLGFVYTSF QERATAVSHG NTARLAKAHG DDVLARTCGT IAADEKRHET AYSRIVEQLL RLDPEGAMLA IADMMRKRIT MPAHLMHDGS DMDLFEHFAS
301: VAQRLGVYTA QDYTDIVEFL VKRWKLEALE GGLSSEGRRA RDFVCGLAPR MRRAAERAAD RAKKDEPRKV KFSWIFDREV VV
101: ARAAALPDEY FVVLVGDMVT EEALPTYQTM INTLDGVRDE TGASACPWAV WTRAWTAEEN RHGDVLNKYM YLSGRVDMRM VEKTVQYLIG SGMDPRTENN
201: PYLGFVYTSF QERATAVSHG NTARLAKAHG DDVLARTCGT IAADEKRHET AYSRIVEQLL RLDPEGAMLA IADMMRKRIT MPAHLMHDGS DMDLFEHFAS
301: VAQRLGVYTA QDYTDIVEFL VKRWKLEALE GGLSSEGRRA RDFVCGLAPR MRRAAERAAD RAKKDEPRKV KFSWIFDREV VV
001: MLAHKSLLSF TTQWATLMPS PSTFLASRPR GPAKISAVAA PVRPALKHQN KIHTMPPEKM EIFKSLDGWA KDQILPLLKP VDQCWQPASF LPDPALPFSE
101: FTDQVRELRE RTASLPDEYF VVLVGDMITE DALPTYQTMI NTLDGVRDET GASESAWASW TRAWTAEENR HGDLLRTYLY LSGRVDMLMV ERTVQHLIGS
201: GMDPGTENNP YLGFVYTSFQ ERATFVSHGN TARLAKSAGD PVLARICGTI AADEKRHENA YVRIVEKLLE IDPNGAVSAV ADMMRKKITM PAHLMTDGRD
301: PMLFEHFSAV AQRLEVYTAD DYADILEFLV GRWRLEKLEG LTGEGQRAQE FVCGLAQRIR RLQERADERA KKLKKTHEVC FSWIFDKQIS V
101: FTDQVRELRE RTASLPDEYF VVLVGDMITE DALPTYQTMI NTLDGVRDET GASESAWASW TRAWTAEENR HGDLLRTYLY LSGRVDMLMV ERTVQHLIGS
201: GMDPGTENNP YLGFVYTSFQ ERATFVSHGN TARLAKSAGD PVLARICGTI AADEKRHENA YVRIVEKLLE IDPNGAVSAV ADMMRKKITM PAHLMTDGRD
301: PMLFEHFSAV AQRLEVYTAD DYADILEFLV GRWRLEKLEG LTGEGQRAQE FVCGLAQRIR RLQERADERA KKLKKTHEVC FSWIFDKQIS V
Arabidopsis Description
S-ACP-DES6Stearoyl-[acyl-carrier-protein] 9-desaturase 6, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q84VY3]
SUBAcon: [plastid]
SUBAcon: [plastid]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.