Factsheet for TraesCS2D01G074200.1

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion, plastid

Predictor Summary:

plastid 3
mitochondrion 5

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS2A01G075500.1	Wheat	plastid	89.75	90.56
TraesCS2B01G090700.1	Wheat	plastid	79.51	89.92
HORVU2Hr1G012600.2	Barley	mitochondrion	78.4	87.13
HORVU2Hr1G012780.1	Barley	mitochondrion	77.95	87.06
TraesCS2D01G074100.1	Wheat	mitochondrion	87.08	85.75
TraesCS2D01G074000.1	Wheat	plastid	76.61	84.94
Os08t0200100-01	Rice	plastid	59.02	65.59
KXG24679	Sorghum	plastid	61.47	65.25
Zm00001d024273_P001	Maize	plastid	59.69	63.21
GSMUA_Achr6P01210_001	Banana	cytosol, endoplasmic reticulum, extracellular, golgi, peroxisome, plasma membrane, plastid, vacuole	38.53	59.25
Os08t0199400-01	Rice	plastid	53.01	56.8
EER91728	Sorghum	mitochondrion, plastid	53.67	56.18
Zm00001d030328_P001	Maize	mitochondrion	52.34	54.15
TraesCS2D01G279500.2	Wheat	golgi, plastid	44.77	51.28
TraesCS3D01G421700.1	Wheat	plastid	44.54	51.02
TraesCS5D01G131500.1	Wheat	plastid	42.98	50.52
TraesCS3D01G403800.1	Wheat	plastid	42.98	50.52
AT5G16230.1	Thale cress	plastid	44.77	50.12
TraesCS3D01G413500.1	Wheat	plastid	46.1	49.52
CDY26509	Canola	plastid	43.88	48.88
CDX69460	Canola	plastid	43.88	48.88
Bra008632.1-P	Field mustard	plastid	43.88	48.88
TraesCS5D01G548700.1	Wheat	plastid	42.54	48.85
AT3G02610.2	Thale cress	plastid	44.77	48.67
GSMUA_Achr5P25190_001	Banana	mitochondrion	7.13	48.48
Os03t0741000-00	Rice	plastid	32.29	48.33
Bra039178.1-P	Field mustard	plastid	42.32	48.1
AT3G02620.2	Thale cress	plastid	43.43	48.03
TraesCS5D01G244700.1	Wheat	plastid	43.21	47.67
CDY57537	Canola	plastid	42.76	46.94
CDY43232	Canola	plastid	42.54	46.7
Os06t0503800-00	Rice	plastid	24.28	44.67
PGSC0003DMT400041719	Potato	cytosol, peroxisome, plastid	12.92	39.73

Protein Annotations

Gene3D:1.10.620.20	MapMan:5.1.7.1	InterPro:Fatty_acid_desaturase-2	InterPro:Ferritin-like_SF	GO:GO:0003674	GO:GO:0003824
GO:GO:0006629	GO:GO:0006631	GO:GO:0008150	GO:GO:0008152	GO:GO:0009987	GO:GO:0016491
GO:GO:0045300	GO:GO:0055114	InterPro:IPR012348	PFAM:PF03405	PIRSF:PIRSF000346	PANTHER:PTHR31155
PANTHER:PTHR31155:SF10	InterPro:RNR-like	SUPFAM:SSF47240	EnsemblPlantsGene:TraesCS2D01G074200	EnsemblPlants:TraesCS2D01G074200.1	TIGR:cd01050

Description

No Description!

Coordinates

chr2D:-:31728514..31729961

Molecular Weight (calculated)

49888.5 Da

IEP (calculated)

6.871

GRAVY (calculated)

-0.246

Length

449 amino acids

Sequence
(BLAST)

001: MATSQSSWLL RHLCPLAMPW TRTGNNIGLK VTNITYWRCS RANNGGTMME DMSMSTANCL AQPAQLQGEA VEVAGVSKRS TRTGRCAAVA VRHEEEGTDD
101: EWLMYLEPAK LEVFDHLEPW AEANVLPLLK PAEVAWQPTD LLPDLASLGA DGFRAACSDI SARAAGLPDA HLVCLVGNMV TEEALPTYQS IPNRFEAVRD
201: LTGSSCTAWA RWIRGWSAEE NRHGDVLNRY LFLSGRIDMR QVERTIHNLI HSGMVMNAAR SPYHGFIYVA FQERATSISH GNTARRANEH GDVALARICG
301: AIAADEKRHE LAYTRIVGKL FEIDPDGSVR ALAYMMRRRI IMPASLVTDG CDGDLFAHYA AVAQQAGIYT ASDYRSILEH LIKQWGVEEL VAAELSDDGR
401: RARDYVCALP KKIRRLEEKA HERNGKKAQP MTSVSFSWIF DRPVNIGMA

Best Arabidopsis Sequence Match ( AT3G02610.1 )
(BLAST)

001: MALLLNSTIT VAMKQNPLVA VSFPRTTCLG SSFSPPRLLR VSCVATNPSK TSEETDKKKF RPIKEVPNQV THTITQEKLE IFKSMENWAQ ENLLSYLKPV
101: EASWQPQDFL PETNDEDRFY EQVKELRDRT KEIPDDYFVV LVGDMITEEA LPTYQTTLNT LDGVKDETGG SLTPWAVWVR AWTAEENRHG DLLNKYLYLS
201: GRVDMRHVEK TIQYLIGSGM DSKFENNPYN GFIYTSFQER ATFISHGNTA KLATTYGDTT LAKICGTIAA DEKRHETAYT RIVEKLFEID PDGTVQALAS
301: MMRKRITMPA HLMHDGRDDD LFDHYAAVAQ RIGVYTATDY AGILEFLLRR WEVEKLGMGL SGEGRRAQDY LCTLPQRIRR LEERANDRVK LASKSKPSVS
401: FSWIYGREVE L

Arabidopsis Description

Plant stearoyl-acyl-carrier desaturase family protein [Source:UniProtKB/TrEMBL;Acc:A0A178V7P2]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.