Factsheet for Os06t0503800-00

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

nucleus 1
vacuole 1
mitochondrion 3
plastid 4

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Os03t0741000-00	Rice	plastid	81.97	66.67
HORVU7Hr1G040140.1	Barley	cytosol, nucleus, peroxisome	49.59	37.69
Os08t0200100-01	Rice	plastid	51.64	31.19
TraesCS7A01G196500.1	Wheat	plastid	49.59	29.8
TraesCS7B01G102300.1	Wheat	plastid	49.59	29.73
GSMUA_Achr6P01210_001	Banana	cytosol, endoplasmic reticulum, extracellular, golgi, peroxisome, plasma membrane, plastid, vacuole	33.2	27.74
KXG24679	Sorghum	plastid	47.54	27.42
TraesCS2D01G074000.1	Wheat	plastid	44.67	26.91
Zm00001d024273_P001	Maize	plastid	45.9	26.42
TraesCS2D01G074100.1	Wheat	mitochondrion	45.49	24.34
TraesCS2D01G074200.1	Wheat	mitochondrion, plastid	44.67	24.28
Os08t0199400-01	Rice	plastid	41.39	24.11
Os02t0504800-01	Rice	plastid	31.56	23.91
PGSC0003DMT400041719	Potato	cytosol, peroxisome, plastid	13.93	23.29
Os03t0423300-01	Rice	plastid	39.34	22.97
Os01t0880800-01	Rice	plastid	33.61	21.52
Os04t0379900-01	Rice	plastid	33.2	20.77
Bra039178.1-P	Field mustard	plastid	33.2	20.51
Os01t0919900-01	Rice	plastid	33.2	20.25
CDY26509	Canola	plastid	33.2	20.1
CDX69460	Canola	plastid	32.79	19.85
Bra008632.1-P	Field mustard	plastid	32.79	19.85
CDY57537	Canola	plastid	33.2	19.8
CDY43232	Canola	plastid	33.2	19.8
AT3G02620.2	Thale cress	plastid	32.79	19.7
AT5G16230.1	Thale cress	plastid	31.97	19.45
AT3G02610.2	Thale cress	plastid	32.38	19.13
GSMUA_Achr5P25190_001	Banana	mitochondrion	3.28	12.12

Protein Annotations

Gene3D:1.10.620.20	MapMan:5.1.7.1	UniProt:A0A0P0WXE7	ProteinID:BAS97940.1	InterPro:Fatty_acid_desaturase-2	InterPro:Ferritin-like_SF
GO:GO:0003674	GO:GO:0003824	GO:GO:0006629	GO:GO:0006631	GO:GO:0008150	GO:GO:0008152
GO:GO:0009987	GO:GO:0016491	GO:GO:0045300	GO:GO:0055114	InterPro:IPR012348	EnsemblPlantsGene:Os06g0503800
EnsemblPlants:Os06t0503800-00	PFAM:PF03405	PANTHER:PTHR31155	PANTHER:PTHR31155:SF10	InterPro:RNR-like	SUPFAM:SSF47240
UniParc:UPI000393C33D	SEG:seg	:	:	:	:

Description

Hypothetical conserved gene. (Os06t0503800-00)

Coordinates

chr6:-:17847303..17848113

Molecular Weight (calculated)

28619.9 Da

IEP (calculated)

12.451

GRAVY (calculated)

-0.840

Length

244 amino acids

Sequence
(BLAST)

001: MCCCCSSRRR RHGSRRTWCP TRRRSARTGS TRRALSSGSA PRGVPDAHLV CQVGNMVMEE ALPTYQSMAN RFESARDVTG ADRMAWARWI CRWSAKENRH
101: GDVLNRYMYL SGRLDMRQVE RTVHRLISSG MAMHAPVSPY HGFSYVVFQE RATAATRHAT SAPMVTTRSP TSVAPSPPTR APRGRLHPRR RDAPRRRPRH
201: LRRDRRRLVL LRRLEQWQQV LLHPWLHLLK HLQPRRRRRR PMRL

Best Arabidopsis Sequence Match ( AT3G02620.3 )
(BLAST)

001: MENWAQENLL SYLKPVETSW QPQDFLPETK DEDRFYEQVK ELRDRTKEIP DDYFVVLVGD MITEEALPTY QTVMNTLDGA KDETGVSLTP WAVWLRAWTA
101: EENRHGDLLN KYLYLSGRVD TRHVEKTIQY LIGSGMDTKY ENNPYNGYIY TSFQERATFI SHANTAKLAT TYGDTTLAKI CGTIAADEKR HEMAYTRIVE
201: KLFEIDPDGT VQALASMMRK RITMPAQLMH DGRDDNLFDH YAAVAQRIGV YTATDYAGIL EFLLRRWEVE KLGMGLSGEG RRAQDYLCTL PQRIRRLEER
301: ADDRVKRASK SKPSVSFSWI YGREVEL

Arabidopsis Description

Plant stearoyl-acyl-carrier-protein desaturase family protein [Source:UniProtKB/TrEMBL;Acc:A0A178VGR6]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.