Factsheet for Os03t0423300-01

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 9
vacuole 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS3D01G413500.1	Wheat	plastid	73.68	73.68
TraesCS3B01G453200.2	Wheat	mitochondrion, plastid	72.73	72.55
TraesCS3A01G418000.1	Wheat	plastid	72.01	71.84
HORVU3Hr1G061520.7	Barley	cytosol, peroxisome	70.81	67.89
HORVU3Hr1G092740.3	Barley	cytosol, peroxisome	70.81	67.27
OQU92381	Sorghum	plastid	71.05	66.15
Os08t0200100-01	Rice	plastid	52.63	54.46
GSMUA_Achr5P25190_001	Banana	mitochondrion	8.37	53.03
GSMUA_Achr6P01210_001	Banana	cytosol, endoplasmic reticulum, extracellular, golgi, peroxisome, plasma membrane, plastid, vacuole	36.6	52.4
Os04t0379900-01	Rice	plastid	46.89	50.26
Os01t0880800-01	Rice	plastid	45.69	50.13
Os08t0199400-01	Rice	plastid	48.33	48.21
CDX69460	Canola	plastid	46.17	47.89
Bra008632.1-P	Field mustard	plastid	46.17	47.89
AT5G16230.1	Thale cress	plastid	45.93	47.88
AT3G02620.2	Thale cress	plastid	46.41	47.78
CDY26509	Canola	plastid	45.93	47.64
Bra039178.1-P	Field mustard	plastid	44.98	47.59
Os01t0919900-01	Rice	plastid	45.22	47.25
Os02t0504800-01	Rice	plastid	36.36	47.2
AT3G02610.2	Thale cress	plastid	46.41	46.97
CDY57537	Canola	plastid	45.22	46.21
CDY43232	Canola	plastid	44.5	45.48
PGSC0003DMT400041719	Potato	cytosol, peroxisome, plastid	15.07	43.15
Os06t0503800-00	Rice	plastid	22.97	39.34
Os03t0741000-00	Rice	plastid	27.75	38.67

Protein Annotations

Gene3D:1.10.620.20	EntrezGene:4333144	MapMan:5.1.7.1	ProteinID:AAP20854.1	ProteinID:ABF96687.1	EMBL:AK070282
ProteinID:BAF12307.1	ProteinID:BAS84757.1	ProteinID:EAZ27374.1	InterPro:Fatty_acid_desaturase-2	InterPro:Ferritin-like_SF	GO:GO:0003674
GO:GO:0003824	GO:GO:0005488	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737
GO:GO:0006629	GO:GO:0006631	GO:GO:0006633	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058
GO:GO:0009507	GO:GO:0009536	GO:GO:0009987	GO:GO:0016491	GO:GO:0045300	GO:GO:0046872
GO:GO:0055114	InterPro:IPR012348	EnsemblPlantsGene:Os03g0423300	EnsemblPlants:Os03t0423300-01	PFAM:PF03405	PIRSF:PIRSF000346
PANTHER:PTHR31155	PANTHER:PTHR31155:SF14	UniProt:Q84MF1	InterPro:RNR-like	SUPFAM:SSF47240	UniParc:UPI00001909BB
RefSeq:XP_015629339.1	SEG:seg	:	:	:	:

Description

Similar to Stearoyl-acyl carrier protein desaturse (EC 1.14.99.6) (Fragment). (Os03t0423300-01)

Coordinates

chr3:-:17623509..17625094

Molecular Weight (calculated)

45368.1 Da

IEP (calculated)

7.944

GRAVY (calculated)

-0.213

Length

418 amino acids

Sequence
(BLAST)

001: MASSGLAVAA TASSAWLCCP NHHIHTSSSR SRKHLLLHGL YGSAPARTRG RRPPVWTAAA ATAAAPADTA ASARREQVEI ARSLNAWVEE NMLPLLTPVD
101: SAWQPHDFLP CSAAGGGEAL AAFTEGVAEL RAGAAGVPDE VLVCLVGNMV TEEALPTYQS MGNRAEGLAD GTGVSPLPWA RWLRGWTAEE NRHGDLLNRY
201: LYLSGRVDMR QVEATVHRLL RNGMEMLAPA SPYHGLIYGA FQERATFISH GHTARLAGQH GDRALAKICG VIAADERRHE AGYTMASGRL FELDPDGMAR
301: ALADVMRGKV TMPGQLMSDG RDGDGEHSLF ARFSAVAERA GVYTARDYGD LVEHFVRRWR VAELAAGLSG EGRRAQEYLC GLAPKIRRME ELAHRRAARI
401: EPAMARFSWI FDRPVMLG

Best Arabidopsis Sequence Match ( AT3G02610.1 )
(BLAST)

001: MALLLNSTIT VAMKQNPLVA VSFPRTTCLG SSFSPPRLLR VSCVATNPSK TSEETDKKKF RPIKEVPNQV THTITQEKLE IFKSMENWAQ ENLLSYLKPV
101: EASWQPQDFL PETNDEDRFY EQVKELRDRT KEIPDDYFVV LVGDMITEEA LPTYQTTLNT LDGVKDETGG SLTPWAVWVR AWTAEENRHG DLLNKYLYLS
201: GRVDMRHVEK TIQYLIGSGM DSKFENNPYN GFIYTSFQER ATFISHGNTA KLATTYGDTT LAKICGTIAA DEKRHETAYT RIVEKLFEID PDGTVQALAS
301: MMRKRITMPA HLMHDGRDDD LFDHYAAVAQ RIGVYTATDY AGILEFLLRR WEVEKLGMGL SGEGRRAQDY LCTLPQRIRR LEERANDRVK LASKSKPSVS
401: FSWIYGREVE L

Arabidopsis Description

Plant stearoyl-acyl-carrier desaturase family protein [Source:UniProtKB/TrEMBL;Acc:A0A178V7P2]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.