Factsheet for Bra039178.1-P

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 9
vacuole 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY57537	Canola	plastid	99.75	96.33
CDY43232	Canola	plastid	97.72	94.38
AT3G02610.2	Thale cress	plastid	90.63	86.68
AT3G02620.2	Thale cress	plastid	85.82	83.5
Bra008632.1-P	Field mustard	plastid	81.01	79.4
Bra000321.1-P	Field mustard	plastid	66.33	65.83
Bra004778.1-P	Field mustard	plastid	66.08	65.09
Bra008631.1-P	Field mustard	plastid	64.3	63.98
Bra001057.1-P	Field mustard	plastid	64.05	63.89
Bra021427.1-P	Field mustard	plastid	63.04	63.04
GSMUA_Achr6P01210_001	Banana	cytosol, endoplasmic reticulum, extracellular, golgi, peroxisome, plasma membrane, plastid, vacuole	46.58	63.01
GSMUA_Achr5P25190_001	Banana	mitochondrion	10.13	60.61
HORVU7Hr1G040140.1	Barley	cytosol, nucleus, peroxisome	46.33	57.01
Zm00001d030165_P001	Maize	cytosol	47.59	55.95
PGSC0003DMT400041719	Potato	cytosol, peroxisome, plastid	19.49	52.74
TraesCS2D01G074000.1	Wheat	plastid	51.65	50.37
TraesCS2A01G075300.1	Wheat	mitochondrion	51.39	49.75
KXG38794	Sorghum	plastid	48.61	48.36
HORVU2Hr1G012600.2	Barley	mitochondrion	48.86	47.77
HORVU2Hr1G012780.1	Barley	mitochondrion	48.61	47.76
TraesCS7A01G196500.1	Wheat	plastid	48.35	47.04
Os08t0200100-01	Rice	plastid	48.1	47.03
TraesCS7B01G102300.1	Wheat	plastid	48.1	46.68
TraesCS5B01G235800.1	Wheat	plastid	47.34	46.52
TraesCS5A01G236800.1	Wheat	plastid	47.09	46.04
Zm00001d024273_P001	Maize	plastid	49.37	45.99
Zm00001d014498_P001	Maize	plastid	47.09	45.59
TraesCS5A01G237000.1	Wheat	plastid	46.58	45.54
TraesCS5B01G235900.1	Wheat	plastid	46.84	45.45
HORVU2Hr1G006990.1	Barley	plastid	46.84	45.23
TraesCS5A01G237800.1	Wheat	plastid	46.58	45.21
Os03t0423300-01	Rice	plastid	47.59	44.98
TraesCS3D01G413500.1	Wheat	plastid	47.59	44.98
TraesCS5D01G244700.1	Wheat	plastid	46.33	44.96
KXG35977	Sorghum	plastid	47.09	44.93
Zm00001d021059_P001	Maize	plastid	46.33	44.74
KXG24679	Sorghum	plastid	47.85	44.68
EER88838	Sorghum	plastid	46.33	44.63
TraesCS3B01G453200.2	Wheat	mitochondrion, plastid	47.34	44.63
TraesCS3A01G418000.1	Wheat	plastid	46.58	43.91
TraesCS2A01G075500.1	Wheat	plastid	49.37	43.82
HORVU3Hr1G061520.7	Barley	cytosol, peroxisome	47.85	43.35
TraesCS2B01G090400.1	Wheat	mitochondrion	49.37	43.33
HORVU5Hr1G068310.1	Barley	plastid	46.84	43.22
HORVU3Hr1G092740.3	Barley	cytosol, peroxisome	47.85	42.95
TraesCS2D01G074200.1	Wheat	mitochondrion, plastid	48.1	42.32
Os08t0199400-01	Rice	plastid	44.81	42.24
TraesCS2D01G074100.1	Wheat	mitochondrion	48.61	42.11
TraesCS2A01G075400.1	Wheat	mitochondrion	48.35	41.89
EER91728	Sorghum	mitochondrion, plastid	45.32	41.72
OQU92381	Sorghum	plastid	47.09	41.43
TraesCS2B01G090700.1	Wheat	plastid	41.52	41.31
Zm00001d030328_P001	Maize	mitochondrion	45.06	41.01
Os06t0503800-00	Rice	plastid	20.51	33.2
Os03t0741000-00	Rice	plastid	25.06	33.0

Protein Annotations

Gene3D:1.10.620.20	MapMan:5.1.7.1	EnsemblPlantsGene:Bra039178	EnsemblPlants:Bra039178.1	EnsemblPlants:Bra039178.1-P	InterPro:Fatty_acid_desaturase-2
InterPro:Ferritin-like_SF	GO:GO:0003674	GO:GO:0003824	GO:GO:0005488	GO:GO:0006629	GO:GO:0006631
GO:GO:0008150	GO:GO:0008152	GO:GO:0009987	GO:GO:0016491	GO:GO:0045300	GO:GO:0046872
GO:GO:0055114	InterPro:IPR012348	UniProt:M4FDK7	PFAM:PF03405	PIRSF:PIRSF000346	PANTHER:PTHR31155
PANTHER:PTHR31155:SF6	InterPro:RNR-like	SUPFAM:SSF47240	UniParc:UPI000254757C	SEG:seg	:

Description

AT3G02610 (E=2e-204) | acyl-[acyl-carrier-protein] desaturase/ oxidoreductase/ transition metal ion binding

Coordinates

chrA05:+:23607962..23610295

Molecular Weight (calculated)

45161.6 Da

IEP (calculated)

6.613

GRAVY (calculated)

-0.499

Length

395 amino acids

Sequence
(BLAST)

001: MKQNPVVAVS SSPSLFLGPS FPRRLRVSCV ATSPRKTSEQ THKKTFRPIK EVPNQITHTI TQEKLEIFKS MENWAQENLL SYLKPVETSW QPQDLLPQTN
101: DEDQFYEQVK ELRDRTREIP DDYFVVLVGD MITEEALPTY QTTLNTLDGV KDETGGSLTP WAVWVRAWTA EENRHGDLLN KYLYLSGRVD MQHVERTIQY
201: LIGSGMDSKF ENNPYNGFIY TSFQERATFI SHANTAKLAT TYGDTTLAKI CGTIAADEKR HETAYTRIVE KLFEIDPDGT VQALASMMRK RITMPAHLMH
301: DGRDDNLFDH YGAVAQRIGV YTAMDYAGIL EFLLRRWKVE SLGVGLTGEG RRAQEYLCSL PQRITRLEER ANDRVKLGSR PSVAFSWIYG REVGL

Best Arabidopsis Sequence Match ( AT3G02610.2 )
(BLAST)

001: MKMALLLNST ITVAMKQNPL VAVSFPRTTC LGSSFSPPRL LRVSCVATNP SKTSEETDKK KFRPIKEVPN QVTHTITQEK LEIFKSMENW AQENLLSYLK
101: PVEASWQPQD FLPETNDEDR FYEQVKELRD RTKEIPDDYF VVLVGDMITE EALPTYQTTL NTLDGVKDET GGSLTPWAVW VRAWTAEENR HGDLLNKYLY
201: LSGRVDMRHV EKTIQYLIGS GMDSKFENNP YNGFIYTSFQ ERATFISHGN TAKLATTYGD TTLAKICGTI AADEKRHETA YTRIVEKLFE IDPDGTVQAL
301: ASMMRKRITM PAHLMHDGRD DDLFDHYAAV AQRIGVYTAT DYAGILEFLL RRWEVEKLGM GLSGEGRRAQ DYLCTLPQRI RRLEERANDR VKLASKSKPS
401: VSFSWIYGRE VEL

Arabidopsis Description

Plant stearoyl-acyl-carrier desaturase family protein [Source:UniProtKB/TrEMBL;Acc:A0A178V7P2]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.