CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 7
peroxisome 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d024273_P001	Maize	plastid	86.52	86.32
HORVU7Hr1G040140.1	Barley	cytosol, nucleus, peroxisome	64.07	84.42
TraesCS7A01G196500.1	Wheat	plastid	70.92	73.89
TraesCS7B01G102300.1	Wheat	plastid	70.21	72.97
Os08t0200100-01	Rice	plastid	68.32	71.53
TraesCS2D01G074000.1	Wheat	plastid	64.3	67.16
EER91728	Sorghum	mitochondrion, plastid	63.12	62.24
TraesCS2D01G074200.1	Wheat	mitochondrion, plastid	65.25	61.47
TraesCS2D01G074100.1	Wheat	mitochondrion	64.78	60.09
GSMUA_Achr5P25190_001	Banana	mitochondrion	8.98	57.58
GSMUA_Achr6P01210_001	Banana	cytosol, endoplasmic reticulum, extracellular, golgi, peroxisome, plasma membrane, plastid, vacuole	39.72	57.53
EES01858	Sorghum	mitochondrion, plastid	48.94	54.47
Os03t0741000-00	Rice	plastid	36.41	51.33
KXG38794	Sorghum	plastid	46.81	49.87
KXG35977	Sorghum	plastid	48.46	49.52
EES10606	Sorghum	plastid	45.86	49.49
AT5G16230.1	Thale cress	plastid	46.34	48.88
EER88838	Sorghum	plastid	47.28	48.78
CDY26509	Canola	plastid	45.86	48.14
CDX69460	Canola	plastid	45.86	48.14
Bra008632.1-P	Field mustard	plastid	45.86	48.14
AT3G02610.2	Thale cress	plastid	46.81	47.94
Bra039178.1-P	Field mustard	plastid	44.68	47.85
Os06t0503800-00	Rice	plastid	27.42	47.54
AT3G02620.2	Thale cress	plastid	45.63	47.54
EES04113	Sorghum	plastid	43.97	46.85
CDY57537	Canola	plastid	44.92	46.45
CDY43232	Canola	plastid	44.44	45.97
OQU92381	Sorghum	plastid	48.7	45.88
KXG30261	Sorghum	plastid	44.44	45.19
PGSC0003DMT400041719	Potato	cytosol, peroxisome, plastid	13.48	39.04
OQU85014	Sorghum	plastid, vacuole	25.3	28.38

Protein Annotations

Gene3D:1.10.620.20	MapMan:5.1.7.1	UniProt:A0A1B6PG81	InterPro:Fatty_acid_desaturase-2	InterPro:Ferritin-like_SF	GO:GO:0003674
GO:GO:0003824	GO:GO:0005488	GO:GO:0006629	GO:GO:0006631	GO:GO:0008150	GO:GO:0008152
GO:GO:0009987	GO:GO:0016491	GO:GO:0045300	GO:GO:0046872	GO:GO:0055114	InterPro:IPR012348
EnsemblPlants:KXG24679	ProteinID:KXG24679	ProteinID:KXG24679.1	PFAM:PF03405	PIRSF:PIRSF000346	PANTHER:PTHR31155
PANTHER:PTHR31155:SF10	InterPro:RNR-like	EnsemblPlantsGene:SORBI_3007G071600	SUPFAM:SSF47240	UniParc:UPI00081AE156	SEG:seg

Description

hypothetical protein

Coordinates

chr7:+:7941116..7943460

Molecular Weight (calculated)

46975.2 Da

IEP (calculated)

8.160

GRAVY (calculated)

-0.286

Length

423 amino acids

Sequence
(BLAST)

001: MATTTTLLAI PAGNGVPCES ANTIQNYYSF KLASSARTRD ALPRIINWRC RSSRNGNGTM TMAALPVVLK QDAEEEWMGY LAPEKLEVLA HLEPWAEAHV
101: LPLLKPAEEA WQPSDLLPDP AALGDDGFHA ACRDLRARAA GVPDAHLVCL VGNMITEEAL PTYHSVPNRF EAVRDLTGAD ATAWARWIRG WSAEENRHGD
201: VLSRYMYLSA RVDMRQVDRT VHRLIASGMA MNAARSPYHG FIYVAFQERA TAVSHGNTAR LVGKHGDHVL ARVCGAIMAD EKRHEAAYTR VVGKLFEVDP
301: DAAVRALGYM MRRRITMPAA LMTDGRDNDL YAHYAAAAQQ TGVYTASDYR GILEHLIRQW RVEELAAGLS GEGRRARDYV CGLPHKIRRM EEKAHDRAAQ
401: AQKKPTPVPF SWIFDRPVSV VIP

Best Arabidopsis Sequence Match ( AT3G02610.2 )
(BLAST)

001: MKMALLLNST ITVAMKQNPL VAVSFPRTTC LGSSFSPPRL LRVSCVATNP SKTSEETDKK KFRPIKEVPN QVTHTITQEK LEIFKSMENW AQENLLSYLK
101: PVEASWQPQD FLPETNDEDR FYEQVKELRD RTKEIPDDYF VVLVGDMITE EALPTYQTTL NTLDGVKDET GGSLTPWAVW VRAWTAEENR HGDLLNKYLY
201: LSGRVDMRHV EKTIQYLIGS GMDSKFENNP YNGFIYTSFQ ERATFISHGN TAKLATTYGD TTLAKICGTI AADEKRHETA YTRIVEKLFE IDPDGTVQAL
301: ASMMRKRITM PAHLMHDGRD DDLFDHYAAV AQRIGVYTAT DYAGILEFLL RRWEVEKLGM GLSGEGRRAQ DYLCTLPQRI RRLEERANDR VKLASKSKPS
401: VSFSWIYGRE VEL

Arabidopsis Description

Plant stearoyl-acyl-carrier desaturase family protein [Source:UniProtKB/TrEMBL;Acc:A0A178V7P2]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.