CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 9

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	plastid
BaCelLo:	plastid
ChloroP:	plastid
iPSORT:	plastid
MultiLoc:	plastid
Predotar:	plastid
PProwler:	plastid
TargetP:	plastid
WoLF PSORT:	plastid
YLoc:	plastid

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d021059_P001	Maize	plastid	83.09	84.11
EER88838	Sorghum	plastid	71.26	71.95
TraesCS5B01G235800.1	Wheat	plastid	60.63	62.44
TraesCS5A01G237000.1	Wheat	plastid	60.39	61.88
TraesCS5A01G236800.1	Wheat	plastid	59.18	60.64
TraesCS5B01G235900.1	Wheat	plastid	58.94	59.95
TraesCS5D01G244700.1	Wheat	plastid	58.45	59.46
TraesCS5A01G237800.1	Wheat	plastid	57.73	58.72
HORVU5Hr1G068310.1	Barley	plastid	60.14	58.18
OQU92381	Sorghum	plastid	56.52	52.12
GSMUA_Achr5P25190_001	Banana	mitochondrion	8.21	51.52
GSMUA_Achr6P01210_001	Banana	cytosol, endoplasmic reticulum, extracellular, golgi, peroxisome, plasma membrane, plastid, vacuole	34.78	49.32
EES01858	Sorghum	mitochondrion, plastid	44.93	48.95
KXG24679	Sorghum	plastid	49.52	48.46
KXG38794	Sorghum	plastid	45.89	47.86
EES10606	Sorghum	plastid	44.69	47.19
Bra039178.1-P	Field mustard	plastid	44.93	47.09
Bra008632.1-P	Field mustard	plastid	45.17	46.4
CDX69460	Canola	plastid	45.17	46.4
AT3G02620.2	Thale cress	plastid	45.41	46.31
CDY57537	Canola	plastid	45.65	46.21
CDY26509	Canola	plastid	44.93	46.15
CDY43232	Canola	plastid	45.41	45.97
AT3G02610.2	Thale cress	plastid	45.65	45.76
AT5G16230.1	Thale cress	plastid	44.2	45.64
EES04113	Sorghum	plastid	43.48	45.34
EER91728	Sorghum	mitochondrion, plastid	45.89	44.29
KXG30261	Sorghum	plastid	43.24	43.03
PGSC0003DMT400041719	Potato	cytosol, peroxisome, plastid	13.29	37.67
OQU85014	Sorghum	plastid, vacuole	22.95	25.2

Protein Annotations

Gene3D:1.10.620.20	MapMan:5.1.7.1	UniProt:A0A1B6QDI8	InterPro:Fatty_acid_desaturase-2	InterPro:Ferritin-like_SF	GO:GO:0003674
GO:GO:0003824	GO:GO:0005488	GO:GO:0006629	GO:GO:0006631	GO:GO:0008150	GO:GO:0008152
GO:GO:0009987	GO:GO:0016491	GO:GO:0045300	GO:GO:0046872	GO:GO:0055114	InterPro:IPR012348
EnsemblPlants:KXG35977	ProteinID:KXG35977	ProteinID:KXG35977.1	PFAM:PF03405	PIRSF:PIRSF000346	PANTHER:PTHR31155
PANTHER:PTHR31155:SF7	InterPro:RNR-like	EnsemblPlantsGene:SORBI_3002G258500	SUPFAM:SSF47240	UniParc:UPI00081AD733	SEG:seg

Description

hypothetical protein

Coordinates

chr2:+:64424687..64425931

Molecular Weight (calculated)

45556.4 Da

IEP (calculated)

7.268

GRAVY (calculated)

-0.287

Length

414 amino acids

Sequence
(BLAST)

001: MLALPWASSP PVPPPVKKKL CFSTSSSSKR TASATIPLVN KKHSASSAHL LLSRGRALMA ATVTAPAFSD DDQRKELLLR HLGEDGGWVE EQMLSLLTPV
101: DEAWQPADLL PTFAAATAEE HRTQVAELQA RAAGVPDELL VCLVGNMITE EGLPAYMTMG NRAGGGAGIV DATGCDDHGW ARWLRGWTAE ENRHGDVLNR
201: YLYLCGRVDM RQVETTVHHL LRRGMSMLEP SCPYHGFIYG AFQERATFVS HAHTGKRAAL HGDACLAKLC GVIAADEKRH EVAYTRVVAR SLEGDPDGVV
301: RALAAVMRAK VTMPGERMTD GRDDNLFDHF SAVAQRAGVY TAADYGDMVE HFVRRWKVAE LEGLSGEGRR AQDYVCGLPR KIRRMEELAH DRAAQKEAQS
401: VNISWVFDRP VRLH

Best Arabidopsis Sequence Match ( AT3G02610.1 )
(BLAST)

001: MALLLNSTIT VAMKQNPLVA VSFPRTTCLG SSFSPPRLLR VSCVATNPSK TSEETDKKKF RPIKEVPNQV THTITQEKLE IFKSMENWAQ ENLLSYLKPV
101: EASWQPQDFL PETNDEDRFY EQVKELRDRT KEIPDDYFVV LVGDMITEEA LPTYQTTLNT LDGVKDETGG SLTPWAVWVR AWTAEENRHG DLLNKYLYLS
201: GRVDMRHVEK TIQYLIGSGM DSKFENNPYN GFIYTSFQER ATFISHGNTA KLATTYGDTT LAKICGTIAA DEKRHETAYT RIVEKLFEID PDGTVQALAS
301: MMRKRITMPA HLMHDGRDDD LFDHYAAVAQ RIGVYTATDY AGILEFLLRR WEVEKLGMGL SGEGRRAQDY LCTLPQRIRR LEERANDRVK LASKSKPSVS
401: FSWIYGREVE L

Arabidopsis Description

Plant stearoyl-acyl-carrier desaturase family protein [Source:UniProtKB/TrEMBL;Acc:A0A178V7P2]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.