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Sorghum
Subcellular Localization
min:
: max

 
Winner_takes_all: plastid

Predictor Summary:
  • plastid 11
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Zm00001d014498_P001 Maize plastid 89.02 89.46
KXG35977 Sorghum plastid 71.95 71.26
TraesCS5B01G235800.1 Wheat plastid 60.0 61.19
TraesCS5A01G237800.1 Wheat plastid 60.49 60.93
TraesCS5A01G237000.1 Wheat plastid 59.76 60.64
TraesCS5A01G236800.1 Wheat plastid 59.51 60.4
TraesCS5B01G235900.1 Wheat plastid 59.27 59.71
TraesCS5D01G244700.1 Wheat plastid 58.54 58.97
HORVU5Hr1G068310.1 Barley plastid 61.22 58.64
GSMUA_Achr5P25190_001 Banana mitochondrion 8.78 54.55
OQU92381 Sorghum plastid 57.32 52.34
GSMUA_Achr6P01210_001 Banana cytosol, endoplasmic reticulum, extracellular, golgi, peroxisome, plasma membrane, plastid, vacuole 34.63 48.63
KXG38794 Sorghum plastid 46.59 48.11
EES01858 Sorghum mitochondrion, plastid 44.39 47.89
EES10606 Sorghum plastid 45.61 47.7
CDY26509 Canola plastid 46.83 47.64
CDX69460 Canola plastid 46.59 47.39
Bra008632.1-P Field mustard plastid 46.59 47.39
KXG24679 Sorghum plastid 48.78 47.28
AT5G16230.1 Thale cress plastid 45.85 46.88
AT3G02620.2 Thale cress plastid 46.34 46.8
Bra039178.1-P Field mustard plastid 44.63 46.33
AT3G02610.2 Thale cress plastid 46.1 45.76
EES04113 Sorghum plastid 44.15 45.59
CDY57537 Canola plastid 45.37 45.48
CDY43232 Canola plastid 45.37 45.48
EER91728 Sorghum mitochondrion, plastid 46.59 44.52
KXG30261 Sorghum plastid 43.9 43.27
PGSC0003DMT400041719 Potato cytosol, peroxisome, plastid 13.17 36.99
OQU85014 Sorghum plastid, vacuole 25.85 28.12
Protein Annotations
Gene3D:1.10.620.20MapMan:5.1.7.1EntrezGene:8061637UniProt:C5Z892EnsemblPlants:EER88838ProteinID:EER88838
ProteinID:EER88838.1InterPro:Fatty_acid_desaturase-2InterPro:Ferritin-like_SFGO:GO:0003674GO:GO:0003824GO:GO:0005488
GO:GO:0006629GO:GO:0006631GO:GO:0008150GO:GO:0008152GO:GO:0009987GO:GO:0016491
GO:GO:0045300GO:GO:0046872GO:GO:0055114InterPro:IPR012348PFAM:PF03405PIRSF:PIRSF000346
PANTHER:PTHR31155PANTHER:PTHR31155:SF7InterPro:RNR-likeEnsemblPlantsGene:SORBI_3010G235300SUPFAM:SSF47240UniParc:UPI0001A88FDF
RefSeq:XP_002437471.1SEG:seg::::
Description
hypothetical protein
Coordinates
chr10:+:57774186..57775808
Molecular Weight (calculated)
45571.7 Da
IEP (calculated)
7.179
GRAVY (calculated)
-0.284
Length
410 amino acids
Sequence
(BLAST)
001: MPGLMTMMAL APSPPMSVRP CFCNKMRGTT MLLVKNRSSS QAHLLGRRSW RAPAATTVAT AAATAFHVDE QEREEMMMRR LAEDGWVDEH MLPLLTPVEE
101: AWQPADLLPS FVVSADEQRS QVAELQARAA GVPDDLLVCL VGSMVTEEGL PGYMSMANRV AGGGDATGCD DHGWARWLRG WTAEENRHGD LLNRYLYLCG
201: RVDMRRVETT VHHLLGRGMR AMLRPSSAYH SLIYGSFQER ATFVSHARTA RQAGLHGDAC LAKLCGVIAA DERRHEAAYT RAAARAFEDD QDGMVRALAA
301: VMRAKITMPG ELMDDGRDER LFDHFSAVAQ RSGVYTAADY ADMVEHFVRR WKVAELGAGL SGEGRRAQDY VCGLPRKIRR MEELAQDRAA QMGAQSVCFS
401: WVFDRPVRIH
Best Arabidopsis Sequence Match ( AT3G02620.1 )
(BLAST)
001: MALLLNSTMT VAMKQNPATA VSFMQTTCLG SSFSPPRHLQ VSCVATNPSK TFRPIKEVSN QVTHTITQEK LEIFKSMENW AQENLLSYLK PVETSWQPQD
101: FLPETKDEDR FYEQVKELRD RTKEIPDDYF VVLVGDMITE EALPTYQTVM NTLDGAKDET GVSLTPWAVW LRAWTAEENR HGDLLNKYLY LSGRVDTRHV
201: EKTIQYLIGS GMDTKYENNP YNGYIYTSFQ ERATFISHAN TAKLATTYGD TTLAKICGTI AADEKRHEMA YTRIVEKLFE IDPDGTVQAL ASMMRKRITM
301: PAQLMHDGRD DNLFDHYAAV AQRIGVYTAT DYAGILEFLL RRWEVEKLGM GLSGEGRRAQ DYLCTLPQRI RRLEERADDR VKRASKSKPS VSFSWIYGRE
401: VEL
Arabidopsis Description
Plant stearoyl-acyl-carrier-protein desaturase family protein [Source:UniProtKB/TrEMBL;Acc:A0A178VGR6]
SUBAcon: [plastid]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.