Factsheet for Zm00001d014498_P001

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 8

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	plastid
ChloroP:	plastid
iPSORT:	plastid
MultiLoc:	plastid
Predotar:	plastid
PProwler:	plastid
TargetP:	plastid
WoLF PSORT:	plastid
YLoc:	plastid

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
EER88838	Sorghum	plastid	89.46	89.02
Zm00001d021059_P001	Maize	plastid	73.77	73.59
TraesCS5B01G235800.1	Wheat	plastid	60.54	61.44
TraesCS5A01G237800.1	Wheat	plastid	61.03	61.18
TraesCS5A01G237000.1	Wheat	plastid	60.54	61.14
TraesCS5A01G236800.1	Wheat	plastid	60.29	60.89
TraesCS5B01G235900.1	Wheat	plastid	60.29	60.44
TraesCS5D01G244700.1	Wheat	plastid	59.56	59.71
HORVU5Hr1G068310.1	Barley	plastid	62.25	59.35
Zm00001d030165_P001	Maize	cytosol	46.57	56.55
GSMUA_Achr5P25190_001	Banana	mitochondrion	8.58	53.03
GSMUA_Achr6P01210_001	Banana	cytosol, endoplasmic reticulum, extracellular, golgi, peroxisome, plasma membrane, plastid, vacuole	35.54	49.66
Zm00001d012221_P001	Maize	plastid	45.59	48.95
Zm00001d025170_P001	Maize	plastid	46.32	48.21
CDY26509	Canola	plastid	47.55	48.14
Bra008632.1-P	Field mustard	plastid	47.3	47.89
CDX69460	Canola	plastid	47.3	47.89
AT3G02620.2	Thale cress	plastid	47.3	47.54
Zm00001d004019_P001	Maize	plastid	45.59	47.45
AT5G16230.1	Thale cress	plastid	46.32	47.13
Bra039178.1-P	Field mustard	plastid	45.59	47.09
Zm00001d012033_P002	Maize	mitochondrion	44.85	46.68
Zm00001d024273_P001	Maize	plastid	48.28	46.46
AT3G02610.2	Thale cress	plastid	46.81	46.25
CDY57537	Canola	plastid	46.32	46.21
CDY43232	Canola	plastid	46.08	45.97
Zm00001d042344_P002	Maize	plastid	45.1	44.66
Zm00001d030328_P001	Maize	mitochondrion	46.08	43.32
Zm00001d050552_P001	Maize	plastid	44.61	41.36
PGSC0003DMT400041719	Potato	cytosol, peroxisome, plastid	13.73	38.36
Zm00001d025262_P001	Maize	mitochondrion, plastid	16.67	16.04

Protein Annotations

Gene3D:1.10.620.20	EntrezGene:100284776	MapMan:5.1.7.1	UniProt:A0A1D6GTR1	ProteinID:AQK66386.1	InterPro:Fatty_acid_desaturase-2
InterPro:Ferritin-like_SF	GO:GO:0003674	GO:GO:0003824	GO:GO:0005488	GO:GO:0006629	GO:GO:0006631
GO:GO:0008150	GO:GO:0008152	GO:GO:0009987	GO:GO:0016491	GO:GO:0045300	GO:GO:0046872
GO:GO:0055114	InterPro:IPR012348	PFAM:PF03405	PIRSF:PIRSF000346	PANTHER:PTHR31155	PANTHER:PTHR31155:SF7
InterPro:RNR-like	SUPFAM:SSF47240	UniParc:UPI000220C49D	EnsemblPlantsGene:Zm00001d014498	EnsemblPlants:Zm00001d014498_P001	EnsemblPlants:Zm00001d014498_T001
SEG:seg	:	:	:	:	:

Description

stearoyl-acyl-carrier-protein desaturase7 stearoyl-acyl-carrier-protein desaturase7

Coordinates

chr5:+:50401776..50403002

Molecular Weight (calculated)

45388.3 Da

IEP (calculated)

6.867

GRAVY (calculated)

-0.251

Length

408 amino acids

Sequence
(BLAST)

001: MPGLMTMMAL VPSPPMSVKQ CFWSSSKKTS GCTVLLVKKC SSSQAHLLGR SWAPAATAAT AAATAFRCDE QELMMMHRLA DDGWVDEHML PLLTPVEEAW
101: QPADLLPSFS VSADEQRSQV ADLQARAAAV PDDLLVCLVG NMVTEEGLPT YMTMGNRVTG ASDATGCDDH GWARWLRGWT AEENRHGDLL NRYLYLCGRV
201: DMRRVETTVH HLLRRGMRTM LRPSSAYHSL IYGSFQERAT FVSHARTARL AGLHGDACLA KLCGVIAADE RRHEAAYTRA SDRAFEEDPD GMVRALAAVM
301: RAKVTMPGEL MADGRDDRLF DHFSAVAQRS GVYTAADYAD MVEHFVRRWK VAELDAGLSG EGRRAQDYVC GLPRKIRRME ELAQDRAAQM EAQSVCFSWV
401: FDRPVRIH

Best Arabidopsis Sequence Match ( AT3G02620.1 )
(BLAST)

001: MALLLNSTMT VAMKQNPATA VSFMQTTCLG SSFSPPRHLQ VSCVATNPSK TFRPIKEVSN QVTHTITQEK LEIFKSMENW AQENLLSYLK PVETSWQPQD
101: FLPETKDEDR FYEQVKELRD RTKEIPDDYF VVLVGDMITE EALPTYQTVM NTLDGAKDET GVSLTPWAVW LRAWTAEENR HGDLLNKYLY LSGRVDTRHV
201: EKTIQYLIGS GMDTKYENNP YNGYIYTSFQ ERATFISHAN TAKLATTYGD TTLAKICGTI AADEKRHEMA YTRIVEKLFE IDPDGTVQAL ASMMRKRITM
301: PAQLMHDGRD DNLFDHYAAV AQRIGVYTAT DYAGILEFLL RRWEVEKLGM GLSGEGRRAQ DYLCTLPQRI RRLEERADDR VKRASKSKPS VSFSWIYGRE
401: VEL

Arabidopsis Description

Plant stearoyl-acyl-carrier-protein desaturase family protein [Source:UniProtKB/TrEMBL;Acc:A0A178VGR6]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.