Factsheet for Zm00001d042344_P002

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 4
mitochondrion 4

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d012033_P002	Maize	mitochondrion	92.48	97.19
EES04113	Sorghum	plastid	91.99	95.47
Os01t0919900-01	Rice	plastid	87.38	90.0
GSMUA_Achr8P00820_001	Banana	cytosol, nucleus, peroxisome	35.44	89.02
TraesCS3D01G421700.1	Wheat	plastid	82.77	86.99
TraesCS3B01G463000.1	Wheat	plastid	82.77	86.77
GSMUA_Achr6P27590_001	Banana	nucleus, peroxisome, plastid	31.07	81.01
KRH71270	Soybean	endoplasmic reticulum, nucleus	75.0	79.03
CDY44250	Canola	plastid	76.21	78.7
CDX79807	Canola	plastid	76.21	78.3
VIT_00s0499g00030.t01	Wine grape	plastid	74.51	78.12
Solyc06g053480.2.1	Tomato	plastid	75.24	78.09
Bra004778.1-P	Field mustard	plastid	75.97	78.05
CDX83464	Canola	plastid	75.24	77.89
Bra000321.1-P	Field mustard	plastid	75.24	77.89
GSMUA_Achr7P22860_001	Banana	plastid	68.2	77.84
VIT_05s0094g00750.t01	Wine grape	plastid	60.92	77.71
CDY17916	Canola	plastid	75.24	77.69
Solyc03g063110.2.1	Tomato	plastid	73.79	77.35
PGSC0003DMT400002555	Potato	plastid	73.79	77.35
GSMUA_Achr8P08750_001	Banana	plastid	66.26	77.34
PGSC0003DMT400042118	Potato	plastid	74.51	77.33
AT2G43710.1	Thale cress	plastid	75.0	77.06
KRH50195	Soybean	plastid	75.0	76.87
Zm00001d025170_P001	Maize	plastid	73.06	76.79
Zm00001d004019_P001	Maize	plastid	72.82	76.53
PGSC0003DMT400041874	Potato	plastid	71.12	74.55
VIT_12s0034g00180.t01	Wine grape	cytosol	19.17	74.53
Solyc11g008680.1.1	Tomato	plastid	70.87	74.3
HORVU3Hr1G094050.3	Barley	plastid	82.77	73.33
TraesCS3A01G426800.3	Wheat	plastid	80.34	68.67
GSMUA_Achr5P25160_001	Banana	plastid	64.32	67.26
VIT_12s0034g00190.t01	Wine grape	extracellular	25.97	64.07
Zm00001d012221_P001	Maize	plastid	58.74	63.68
Zm00001d050552_P001	Maize	plastid	66.5	62.27
Zm00001d030165_P001	Maize	cytosol	46.84	57.44
Zm00001d024273_P001	Maize	plastid	48.3	46.93
Zm00001d021059_P001	Maize	plastid	45.15	45.48
Zm00001d014498_P001	Maize	plastid	44.66	45.1
Zm00001d030328_P001	Maize	mitochondrion	42.48	40.32
Zm00001d025262_P001	Maize	mitochondrion, plastid	25.49	24.76

Protein Annotations

Gene3D:1.10.620.20	EntrezGene:100191672	MapMan:5.1.7.1	UniProt:A0A1D6N317	InterPro:Fatty_acid_desaturase-2	InterPro:Ferritin-like_SF
GO:GO:0003674	GO:GO:0003824	GO:GO:0005488	GO:GO:0006629	GO:GO:0006631	GO:GO:0008150
GO:GO:0008152	GO:GO:0009987	GO:GO:0016491	GO:GO:0045300	GO:GO:0046872	GO:GO:0055114
InterPro:IPR012348	ProteinID:ONM35094.1	PFAM:PF03405	PIRSF:PIRSF000346	PANTHER:PTHR31155	PANTHER:PTHR31155:SF11
InterPro:RNR-like	SUPFAM:SSF47240	UniParc:UPI000843C825	EnsemblPlantsGene:Zm00001d042344	EnsemblPlants:Zm00001d042344_P002	EnsemblPlants:Zm00001d042344_T002
SEG:seg	:	:	:	:	:

Description

stearoyl-acyl-carrier-protein desaturase1 stearoyl-acyl-carrier-protein desaturase1

Coordinates

chr3:+:162243684..162248792

Molecular Weight (calculated)

46753.8 Da

IEP (calculated)

6.905

GRAVY (calculated)

-0.433

Length

412 amino acids

Sequence
(BLAST)

001: MALRLNDVAL CLSPPLAARR RRSRSRSSGR FVAVASMTSA VSTNLQQASS GGEDACLLSR VENKKPFAPP REVHVQVTHS MPPHKIEIFK SLDDWARDNI
101: LTHLKPVEKC WQPQDFLPDP ASEGFHDEVK ELRERAKEIP DDYFVCLVGD MITEEALPTY QTMLNTLDGV RDETGASPTA WAVWTRAWTA EENRHGDLLN
201: KYMYLTGRVD MRQIEKTIQY LIGSGMDPRT ENNPYLGFIY TSFQERATFI SHGNTARHAK DFGDLKLAQI CGIIASDEKR HETAYTKIVE KLFEIDPDGT
301: VVALADMMRK KISMPAHLMF DGQDDKLFEH FSMVAQRLGV YTARDYADIL EFLVDRWKVV NLTGLSGEGN KAQDYLCTLA SRIRRLEERA QSRAKKAGTL
401: PFSWVYGRDV QL

Best Arabidopsis Sequence Match ( AT2G43710.1 )
(BLAST)

001: MALKFNPLVA SQPYKFPSST RPPTPSFRSP KFLCLASSSP ALSSGPKEVE SLKKPFTPPR EVHVQVLHSM PPQKIEIFKS MENWAEENLL IHLKDVEKSW
101: QPQDFLPDPA SDGFEDQVRE LRERARELPD DYFVVLVGDM ITEEALPTYQ TMLNTLDGVR DETGASPTSW AIWTRAWTAE ENRHGDLLNK YLYLSGRVDM
201: RQIEKTIQYL IGSGMDPRTE NNPYLGFIYT SFQERATFIS HGNTARQAKE HGDIKLAQIC GTIAADEKRH ETAYTKIVEK LFEIDPDGTV MAFADMMRKK
301: ISMPAHLMYD GRNDNLFDNF SSVAQRLGVY TAKDYADILE FLVGRWKIQD LTGLSGEGNK AQDYLCGLAP RIKRLDERAQ ARAKKGPKIP FSWIHDREVQ
401: L

Arabidopsis Description

FAB2Stearoyl-[acyl-carrier-protein] 9-desaturase 7, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:O22832]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.