CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 9
mitochondrion 2

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Os03t0423300-01	Rice	plastid	66.15	71.05
TraesCS3D01G413500.1	Wheat	plastid	65.03	69.86
TraesCS3B01G453200.2	Wheat	mitochondrion, plastid	64.59	69.21
TraesCS3A01G418000.1	Wheat	plastid	64.14	68.74
HORVU3Hr1G061520.7	Barley	cytosol, peroxisome	63.7	65.6
HORVU3Hr1G092740.3	Barley	cytosol, peroxisome	63.7	65.0
EER88838	Sorghum	plastid	52.34	57.32
KXG35977	Sorghum	plastid	52.12	56.52
GSMUA_Achr5P25190_001	Banana	mitochondrion	7.8	53.03
GSMUA_Achr6P01210_001	Banana	cytosol, endoplasmic reticulum, extracellular, golgi, peroxisome, plasma membrane, plastid, vacuole	33.41	51.37
KXG38794	Sorghum	plastid	44.99	50.88
EES01858	Sorghum	mitochondrion, plastid	42.76	50.53
KXG30261	Sorghum	plastid	46.1	49.76
EES10606	Sorghum	plastid	42.98	49.23
KXG24679	Sorghum	plastid	45.88	48.7
EES04113	Sorghum	plastid	42.76	48.36
CDY26509	Canola	plastid	42.32	47.15
AT5G16230.1	Thale cress	plastid	42.09	47.13
Bra039178.1-P	Field mustard	plastid	41.43	47.09
Bra008632.1-P	Field mustard	plastid	42.09	46.9
CDX69460	Canola	plastid	42.09	46.9
AT3G02610.2	Thale cress	plastid	42.76	46.49
EER91728	Sorghum	mitochondrion, plastid	44.32	46.39
AT3G02620.2	Thale cress	plastid	41.87	46.31
CDY57537	Canola	plastid	41.65	45.72
CDY43232	Canola	plastid	41.43	45.48
PGSC0003DMT400041719	Potato	cytosol, peroxisome, plastid	14.03	43.15
OQU85014	Sorghum	plastid, vacuole	29.4	35.01

Protein Annotations

Gene3D:1.10.620.20	MapMan:5.1.7.1	EntrezGene:8066284	UniProt:A0A1Z5S8Y7	InterPro:Fatty_acid_desaturase-2	InterPro:Ferritin-like_SF
GO:GO:0003674	GO:GO:0003824	GO:GO:0005488	GO:GO:0006629	GO:GO:0006631	GO:GO:0008150
GO:GO:0008152	GO:GO:0009987	GO:GO:0016491	GO:GO:0045300	GO:GO:0046872	GO:GO:0055114
InterPro:IPR012348	EnsemblPlants:OQU92381	ProteinID:OQU92381	ProteinID:OQU92381.1	PFAM:PF03405	PIRSF:PIRSF000346
PANTHER:PTHR31155	PANTHER:PTHR31155:SF14	InterPro:RNR-like	EnsemblPlantsGene:SORBI_3001G334501	SUPFAM:SSF47240	UniParc:UPI0001A82060
RefSeq:XP_002465116.1	SEG:seg	:	:	:	:

Description

hypothetical protein

Coordinates

chr1:+:62342119..62343997

Molecular Weight (calculated)

48043.1 Da

IEP (calculated)

6.950

GRAVY (calculated)

-0.110

Length

449 amino acids

Sequence
(BLAST)

001: MATQGLATVM TVKLGSLGWS KSNYSSGGGA ALRLLLLSPA QAQPSVHALR ACSSSSCSRG AVAGRWSAAA SSATSAPVDS SSGGVAGGGE MMVEWPAAPR
101: EQVEAIRSLN GWVAENMLPL LTPVDSAWQP HDYLPRSTAA AAAGGGEAND NDRAFAEELA ELRAAAACVP DDVLVCLVGN MVTEEALPTY QSMFNRTDGV
201: GDDTGASAVP WARWIRGWTA EENRHGDLLN RYLYLTGRVD MRQVEITIHH LLSNGMEMLM PKSPYHSLIY ASFQERATFI SHGHTARLAV KHGDRTLSKI
301: CGVVAADERR HEAAYTRASA ELFDVDPDGM VRALAYVMLG KVTMPGLLMS DGLGGGGDSL FARFSAVAQR AGVYTASDYG DMVEHFVRRW RVADLGAGLS
401: GEGRRAQEYV CGLAPKIRRM EELAHRRAAR GEPGLARFSW IFNRAVVVG

Best Arabidopsis Sequence Match ( AT3G02610.1 )
(BLAST)

001: MALLLNSTIT VAMKQNPLVA VSFPRTTCLG SSFSPPRLLR VSCVATNPSK TSEETDKKKF RPIKEVPNQV THTITQEKLE IFKSMENWAQ ENLLSYLKPV
101: EASWQPQDFL PETNDEDRFY EQVKELRDRT KEIPDDYFVV LVGDMITEEA LPTYQTTLNT LDGVKDETGG SLTPWAVWVR AWTAEENRHG DLLNKYLYLS
201: GRVDMRHVEK TIQYLIGSGM DSKFENNPYN GFIYTSFQER ATFISHGNTA KLATTYGDTT LAKICGTIAA DEKRHETAYT RIVEKLFEID PDGTVQALAS
301: MMRKRITMPA HLMHDGRDDD LFDHYAAVAQ RIGVYTATDY AGILEFLLRR WEVEKLGMGL SGEGRRAQDY LCTLPQRIRR LEERANDRVK LASKSKPSVS
401: FSWIYGREVE L

Arabidopsis Description

Plant stearoyl-acyl-carrier desaturase family protein [Source:UniProtKB/TrEMBL;Acc:A0A178V7P2]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.