Factsheet for HORVU7Hr1G040140.1

Subcellular Localization

min:

: max

Winner_takes_all: peroxisome, nucleus, cytosol

Predictor Summary:

peroxisome 1
nucleus 1
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol, nucleus, peroxisome
Any Predictor:	cytosol, nucleus, peroxisome
MultiLoc:	peroxisome
WoLF PSORT:	nucleus
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS7A01G196500.1	Wheat	plastid	96.88	76.6
TraesCS7B01G102300.1	Wheat	plastid	95.02	74.94
Os08t0200100-01	Rice	plastid	86.6	68.81
KXG24679	Sorghum	plastid	84.42	64.07
Zm00001d024273_P001	Maize	plastid	82.24	62.26
HORVU2Hr1G012780.1	Barley	mitochondrion	75.7	60.45
HORVU2Hr1G012600.2	Barley	mitochondrion	74.45	59.16
HORVU2Hr1G006990.1	Barley	plastid	72.9	57.21
GSMUA_Achr6P01210_001	Banana	cytosol, endoplasmic reticulum, extracellular, golgi, peroxisome, plasma membrane, plastid, vacuole	50.16	55.14
GSMUA_Achr5P25190_001	Banana	mitochondrion	11.21	54.55
HORVU3Hr1G091320.2	Barley	plastid	60.75	51.59
Os03t0741000-00	Rice	plastid	46.73	50.0
Os06t0503800-00	Rice	plastid	37.69	49.59
HORVU3Hr1G061520.7	Barley	cytosol, peroxisome	65.73	48.39
HORVU3Hr1G092740.3	Barley	cytosol, peroxisome	65.73	47.95
HORVU5Hr1G039730.1	Barley	plastid	56.07	46.75
Bra039178.1-P	Field mustard	plastid	57.01	46.33
AT5G16230.1	Thale cress	plastid	57.63	46.13
HORVU5Hr1G068310.1	Barley	plastid	61.37	46.03
CDY26509	Canola	plastid	57.63	45.91
CDX69460	Canola	plastid	57.63	45.91
Bra008632.1-P	Field mustard	plastid	57.63	45.91
AT3G02610.2	Thale cress	plastid	58.88	45.76
AT3G02620.2	Thale cress	plastid	57.63	45.57
HORVU5Hr1G123110.1	Barley	mitochondrion, plastid	55.76	44.86
CDY57537	Canola	plastid	57.01	44.74
CDY43232	Canola	plastid	56.7	44.5
HORVU2Hr1G068670.2	Barley	mitochondrion, plastid	57.63	41.57
HORVU3Hr1G094050.3	Barley	plastid	56.7	39.14
PGSC0003DMT400041719	Potato	cytosol, peroxisome, plastid	17.45	38.36

Protein Annotations

Gene3D:1.10.620.20	MapMan:5.1.7.1	UniProt:A0A287W6I8	InterPro:Fatty_acid_desaturase-2	InterPro:Ferritin-like_SF	GO:GO:0003674
GO:GO:0003824	GO:GO:0005488	GO:GO:0006629	GO:GO:0006631	GO:GO:0008150	GO:GO:0008152
GO:GO:0009987	GO:GO:0016491	GO:GO:0045300	GO:GO:0046872	GO:GO:0055114	EnsemblPlantsGene:HORVU7Hr1G040140
EnsemblPlants:HORVU7Hr1G040140.1	InterPro:IPR012348	PFAM:PF03405	PIRSF:PIRSF000346	PANTHER:PTHR31155	PANTHER:PTHR31155:SF10
InterPro:RNR-like	SUPFAM:SSF47240	UniParc:UPI000B47691C	SEG:seg	:	:

Description

No Description!

Coordinates

chrchr7H:-:107985789..107987642

Molecular Weight (calculated)

35792.7 Da

IEP (calculated)

6.959

GRAVY (calculated)

-0.315

Length

321 amino acids

Sequence
(BLAST)

001: MLPLLKPADE VWQPADMLPD AAALGADGFH EACLDLRARA EGVPDAQLVC LVGNMVTEEA LPTYQSMSNR FEGTRDATGA DGTAWARWIR GWSAEENRHG
101: DVLSRYMYLS GRLDMRQVER TVHRLISSGM AMHAPASPYH GFIYVSFQER ATAISHGNTA RQVRAHGDAA LARICGAIAA DEKRHEAAYT RVVAKLFEVD
201: PDAAVRAMAY MMRRRITMPA ALMDDGRDAD LFAHYAAAAQ QAGVYTASDY RGILEHLIRQ WRVEELSAGL SGEGRRARDY VCALPDKIRR MEEKAHDRVR
301: KEPTPVPFSW IFDRPVSVVL H

Best Arabidopsis Sequence Match ( AT3G02610.1 )
(BLAST)

001: MALLLNSTIT VAMKQNPLVA VSFPRTTCLG SSFSPPRLLR VSCVATNPSK TSEETDKKKF RPIKEVPNQV THTITQEKLE IFKSMENWAQ ENLLSYLKPV
101: EASWQPQDFL PETNDEDRFY EQVKELRDRT KEIPDDYFVV LVGDMITEEA LPTYQTTLNT LDGVKDETGG SLTPWAVWVR AWTAEENRHG DLLNKYLYLS
201: GRVDMRHVEK TIQYLIGSGM DSKFENNPYN GFIYTSFQER ATFISHGNTA KLATTYGDTT LAKICGTIAA DEKRHETAYT RIVEKLFEID PDGTVQALAS
301: MMRKRITMPA HLMHDGRDDD LFDHYAAVAQ RIGVYTATDY AGILEFLLRR WEVEKLGMGL SGEGRRAQDY LCTLPQRIRR LEERANDRVK LASKSKPSVS
401: FSWIYGREVE L

Arabidopsis Description

Plant stearoyl-acyl-carrier desaturase family protein [Source:UniProtKB/TrEMBL;Acc:A0A178V7P2]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.